Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 16 Aligned Residues 415 % Identity 31% Template c3aw5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:multicopper oxidase; PDBTitle: structure of a multicopper oxidase from the hyperthermophilic archaeon2 pyrobaculum aerophilum Resolution 2.00 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	G	A	G	Q	S	T	F	G	G	K	T	A	T	T	W	G	Y	.	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	E	E	T	T	L	H	W	H	G	L	E	V	P	G	E	V	D	G	G	P	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		V	P	P	L	I	K	E	A	T	Y	I	E	A	T	A	S	G	Y	M	A	E	G	V	L	N	P	T	I	I	L	R	R	G	Q	R	V	D	M	T	L	K	N	K	L	T	E	P	T	I	V	H	W	H	G	F	D	V	N	W	H	N	D	A	H	P	S	F	A	I	T	P	G	E	S	Y	N	Y	S	F	D
Template Known Secondary structure							S			S						T	T					T	T			S							T	T											S	S	S		B						T									T		G	G	G		B		T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L	P	K	Q	W	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A	D	G	Q	I	D	Y	Q	L	D	V	M	T	A	A	V	G	W	F
Query Conservation
Alig confidence																																								.	.	.																										.
Template Conservation																																								.	.	.																										.
Template Sequence		V	V	N	R	A	G	T	Y	L	Y	H	P	H	P	H	G	L	T	A	K	Q	F	Y	M	G	Q	L	G	L	V	I	V	E	D	S	G	S	D	.	.	.	L	G	F	K	Y	G	V	N	D	L	P	L	V	I	S	D	R	R	F	I	G	G	A	P	V	.	Y	N	P	T	P	M	E	M	I	A	G	F	L
Template Known Secondary structure				S		S										T	T	T							T	T										T	T	T	T	.	.	.	T	T			B	T	T	T													T	T				.
Template Predicted Secondary structure																																								.	.	.																										.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		G	D	T	L	L	T	N	G	A	I	Y	P	Q	H	A	A	P	R	G	W	L	R	L	R	L	L	N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	.	.	.	.	.	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	V	K	V	S	E	L	P	V	L	M	G	E	R	F	E	V	L	V
Query Conservation																																												.	.	.	.	.
Alig confidence																																								.				.	.	.	.	.
Template Conservation																																								.
Template Sequence		G	N	A	V	L	V	N	G	V	K	D	A	V	F	K	L	S	G	G	S	Y	R	L	R	L	V	N	G	S	N	A	R	L	Y	M	L	S	I	.	V	K	K	N	G	D	V	V	P	M	R	L	I	A	V	D	Q	G	F	L	A	R	P	I	E	V	R	A	L	F	L	A	P	A	E	R	A	E	V	V	V
Template Known Secondary structure			S					T	T			T																		S	S	S								.			T	T	S											T	T										S						T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	N	D	N	K	P	F	D	L	V	T	L	P	V	S	Q	M	G	M	A	I	A	P	F	D	K	P	H	P	V	M	R	I	Q	P	I	A	I	S	A	S	G	A	L	P	D	T	L	S	S	L	P	A	L	P	S	L	E	G	L	T	V	R	K	L	Q	L	S	M	D	P	M	L	D	M	M	G	M	Q
Query Conservation
Alig confidence						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	G	E	.	G	V	Y	L	L	K	N	T	P	F	D	P	M	H	L	E	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	M	Q	E	A	L	P	E	G	S	E	Y	T	I	A	T	F	L	V	E	G	K	G	E	A	V	P	V	E	A	L	S	D	P	P	P	E	P	P	K	P	T
Template Known Secondary structure					S	.																T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					S	S		T	T	S																						S										S
Template Predicted Secondary structure						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.															.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		M	L	M	E	K	Y	G	D	Q	A	M	A	G	M	D	H	S	Q	M	M	G	H	M	G	H	G	N	M	N	H	M	N	H	G	G	K	F	D	F	H	H	A	N	K	I	N	G	Q	A	F	D	M	N	K	P	M	F	.	A	A	A	K	G	Q	Y	E	R	W	V	I	S	G	V	G	D	M	M	L	H	P
Query Conservation																																																											.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	R	R	F	A	L	S	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Q	W	T	I	N	G	M	F	W	N	A	S	N	P	L	F	E	H	V	S	V	E	G	V	E	L	W	E	I	V	N	D	K	A	S	M	P	H	P
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T	B				T	T		T	T																		S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.																														.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.													.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		F	H	I	H	G	T	Q	F	R	I	L	S	E	N	G	K	P	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	H	R	A	G	W	K	D	T	V	K	V	E	G	N	V	S	.	E	V	L	V	K	F	N	H	D	A	P	K	E	H	A	Y	M	A	H	C	H	L	L	E	H	E	D	T	G	M	M
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																	.													.
Template Conservation																																																															.
Template Sequence		M	H	L	H	G	F	P	M	W	I	I	E	R	K	D	S	P	R	Q	V	A	E	L	A	V	D	N	R	G	R	L	P	T	D	L	G	L	K	D	T	V	L	I	W	P	G	E	T	V	K	I	V	V	N	F	D	A	K	K	R	G	.	Q	L	F	P	F	H	C	H	N	L	E	H	E	D	G	G	M	M
Template Known Secondary structure					S	S	S		B							S							T	T			S	T	T				G	G	G	G	S		B	S						T	T											G	G	G	T	T	.								S	S						T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		512	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	F	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	I	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.