Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 11 Aligned Residues 450 % Identity 22% Template c2q9oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:laccase-1; PDBTitle: near-atomic resolution structure of a melanocarpus albomyces laccase Resolution 1.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.
Predicted Secondary structure																		.	.							.																																	.															.
Query SS confidence																		.	.							.																																	.															.
Query Sequence		T	T	D	A	R	N	R	I	Q	L	T	I	G	A	G	Q	.	.	S	T	F	G	G	K	.	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	.	T	E	E	T	T	L	H	W	H	G	L	E	V	P	.	G	E	V	D	G	G	P
Query Conservation																		.	.							.																																	.															.
Alig confidence																		.	.							.																																	.															.
Template Conservation
Template Sequence		D	T	G	V	T	Q	S	Y	V	F	N	L	T	E	V	D	N	W	M	G	P	D	G	V	V	K	E	K	V	M	L	I	N	G	N	I	M	G	P	N	I	V	A	N	W	G	D	T	V	E	V	T	V	I	N	N	L	V	T	N	G	T	S	I	H	W	H	G	I	Q	K	D	T	N	L	H	D	G	A	N
Template Known Secondary structure																						T	T	S										T	T	B	S	S								T	T												S	S			B						T			T	T		G	G	G	S			B
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
					116	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.							.
Query SS confidence		.	.	.							.
Query Sequence		.	.	.	Q	G	I	I	P	P	.	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L	P	K	Q	W	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S
Query Conservation		.	.	.							.
Alig confidence		.	.	.							.													.											.	.	.	.																						.	.	.	.	.	.
Template Conservation																								.											.	.	.	.																						.	.	.	.	.	.
Template Sequence		G	V	T	E	C	P	I	P	P	K	G	G	Q	R	T	Y	R	W	R	A	R	Q	.	Y	G	T	S	W	Y	H	S	H	F	.	.	.	.	S	A	Q	Y	G	N	G	V	V	G	T	I	Q	I	N	G	P	A	S	L	P	.	.	.	.	.	.	Y	D	I	D	L	G	V	F	P	I	T	D	Y	Y	Y	R
Template Known Secondary structure		T	T	T	B			B		T	T	T											S	.										S	.	.	.	.	T	T	G	G	G	G	T												S	S		.	.	.	.	.	.		S													S	S
Template Predicted Secondary structure																								.											.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	G	Q	I	D	Y	Q	L	D	V	M	T	A	A	V	G	W	F	G	D	T	L	L	T	N	G	A	.	.	.	.	.	.	.	.	.	.	I	Y	P	Q	H	A	A	P	R	G	W	L	R	L	R	L	L	N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation											.	.	.																																																								.
Template Sequence		A	A	D	D	L	V	H	F	T	.	.	.	Q	N	N	A	P	P	F	S	D	N	V	L	I	N	G	T	A	V	N	P	N	T	G	E	G	Q	Y	A	N	V	T	L	T	P	G	K	R	H	R	L	R	I	L	N	T	S	T	E	N	H	F	Q	V	S	L	.	V	N	H	T	M	T	V	I	A	A	D	M
Template Known Secondary structure											.	.	.	T	T	S					B	S					T	T	B		B		T	T	T			B									T	T												S	S								.	T	T	B								T	T
Template Predicted Secondary structure											.	.	.																																																								.
Template SS confidence
		179	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	P	E	P	V	K	V	S	E	L	P	V	L	M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T	L	P	V	S	Q	M	G	M	A	I	A	P	F	D	K	P	H	P	V	M	R	I	Q	P	I	A	I	S	A	S	G	A	L	P	D	T	L	S	S	L	P	A	L	P
Query Conservation
Alig confidence					.																																									.																		.	.	.	.	.	.
Template Conservation					.																																									.																		.	.	.	.	.	.
Template Sequence		V	P	V	.	N	A	M	T	V	D	S	L	F	L	A	V	G	Q	R	Y	D	V	V	I	D	A	S	R	A	P	D	N	Y	W	F	N	V	T	F	G	G	Q	A	A	.	C	G	G	S	L	N	P	H	P	A	A	I	F	H	Y	A	G	.	.	.	.	.	.	A	P	G	G	L	P	T	D	E	G	T	P
Template Known Secondary structure					.						S						T	T											S		S	S										G	G	G	T	.	T			B	S	S	S									T	T	.	.	.	.	.	.	S			S
Template Predicted Secondary structure					.																																									.																		.	.	.	.	.	.
Template SS confidence
		255	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	G	L	T	V	R	K	L	Q	L	S	M	D	P	M	L	D	M	M	G	M	Q	M	L	M	E	K	Y	G	D	Q	A	M	A	G	M	D	H	S	Q	M	M	G	H	M	G	H	G	N	M	N	H	M	N	H	G	G	K	F	D	F	H	H	A	N	K	I	N	G	Q	A	F	D	M	N	K	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	D	H	Q	C	L	D	T	L	D	V	R	P	V	V	P	R	S	V	P	V	N	S	F	V	K	R	P	D	N	T	L	P	V	A	L	D	L	T	G	T	P	L	F	V	W	K	V	N	G	S	D	I	N	V	D	W	G	K	P	I	I	D	Y	I	L	T	G	N	T	S	Y	P	V	S	D	N	I	V
Template Known Secondary structure						T	T				S				B	S	S			B				T	T					G	G	G									S	S	S	S	S						T	T	B						T	T	S									T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460																			.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	A	A	K	G	Q	Y	E	R	W	V	I	S	G	.	.	.	V	G	D	M	M	L	H	P	F	H	I	H	G	T	Q	F	R	I	L	S	E	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	A	H	R	A	G	W	K	D	T	V	K	V	E	G	N	V	S
Query Conservation																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																																.
Template Sequence		Q	V	D	A	V	D	Q	W	T	Y	W	L	I	E	N	D	P	E	G	P	F	S	L	P	H	P	M	H	L	H	G	H	D	F	L	V	L	G	R	S	P	D	V	P	A	A	S	Q	Q	R	F	V	F	D	P	A	V	D	L	A	R	L	N	G	D	N	P	P	R	R	D	T	T	M	L	P	A	G	.	G
Template Known Secondary structure						S	S											T	T	S	S										S	S	S								S					T	T	S												G	G	G				B	S					S						T	T	.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	V	K	F	N	H	D	A	P	K	E	H	A	Y	M	A	H	C	H	L	L	E	H	E	D	T	G	M	M	L	G	F	T	V
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		W	L	L	L	A	F	R	T	D	N	P	G	.	.	A	W	L	F	H	C	H	I	A	W	H	V	S	G	G	L	S	V	D	F	L	E
Template Known Secondary structure											S			.	.														T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.