Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 13 Aligned Residues 448 % Identity 20% Template c1v10A_ PDB info PDB header:oxidase Chain: A: PDB Molecule:laccase; PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally2 twinned crystals Resolution 1.7 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.
Predicted Secondary structure																				.																																			.	.	.	.	.															.	.
Query SS confidence																				.																																			.	.	.	.	.															.	.
Query Sequence		A	R	N	R	I	Q	L	T	I	G	A	G	Q	S	T	F	G	G	.	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	.	.	.	.	.	E	E	T	T	L	H	W	H	G	L	E	V	P	G	.	.	E	V	D	G	G	P
Query Conservation																				.																																			.	.	.	.	.															.	.
Alig confidence																				.																																			.	.	.	.	.															.	.
Template Conservation
Template Sequence		A	T	V	A	L	D	L	H	I	L	N	A	N	L	D	P	D	G	T	G	A	R	S	A	V	T	A	E	G	T	T	I	A	P	L	I	T	G	N	I	D	D	R	F	Q	I	N	V	I	D	Q	L	T	D	A	N	M	R	R	A	T	S	I	H	W	H	G	F	F	Q	A	G	T	T	E	M	D	G	P	A
Template Known Secondary structure				S													T	T	S	S									S	S	S	S	S								T	T														T	T	S				B						T				T	T		G	G	G	S			B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
					116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L	P	K	Q	W	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A
Query Conservation		.	.	.
Alig confidence		.	.	.																														.	.	.	.																													.
Template Conservation																																		.	.	.	.																													.
Template Sequence		F	V	N	Q	C	P	I	I	P	N	E	S	F	V	Y	D	F	V	V	P	G	Q	A	G	T	Y	W	Y	H	S	H	L	.	.	.	.	S	T	Q	Y	C	D	G	L	R	G	A	F	V	V	Y	D	P	N	D	P	H	L	S	L	Y	D	V	D	.	D	A	S	T	V	I	T	I	A	D	W	Y	H	S	L
Template Known Secondary structure		T	T	T	B			B		T	T										T	T											S	.	.	.	.	T	T	G	G	G	G	T										T	T		T	T	G	G	G		S	B		.	S	G	G	G									S	S
Template Predicted Secondary structure																																		.	.	.	.																													.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		D	G	Q	I	D	Y	Q	L	D	V	M	T	A	A	V	G	W	F	G	D	T	L	L	T	N	G	A	I	Y	P	Q	H	A	A	.	P	R	G	W	L	R	L	R	L	L	N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	V	K	V	S
Query Conservation																																				.
Alig confidence											.																									.																							.																.
Template Conservation											.																																																.																.
Template Sequence		S	T	K	A	P	P	A	P	D	.	T	T	L	I	N	G	L	G	R	N	S	A	N	P	S	A	G	Q	L	A	V	V	S	V	Q	S	G	K	R	Y	R	F	R	I	V	S	T	S	C	F	P	N	Y	A	F	S	I	.	D	G	H	R	M	T	V	I	E	V	D	G	V	S	H	.	Q	P	L	T	V	D
Template Known Secondary structure							S			S	.					T	T	B				S	S		G	G	G	S									T	T												S	S								.	T	T									T	T				.						S
Template Predicted Secondary structure											.																																																.																.
Template SS confidence
		156	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	V	L	M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T	L	P	V	S	Q	M	G	M	A	I	A	P	F	D	K	P	H	P	V	M	R	I	Q	P	I	A	I	S	A	S	G	A	L	P	D	T	L	S	S	L	P	A	L	P	S	L	E	G	L	T	V	R	K	L
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	T	I	F	A	G	Q	R	Y	S	V	V	V	E	A	N	Q	A	V	G	N	Y	W	I	R	A	N	P	S	N	G	R	N	G	F	T	G	G	I	N	S	A	I	F	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	A	V	A	E	P	T	T	S	Q	N	S	G	T	A	L	N	E	A
Template Known Secondary structure		B					T	T											S		S	S									S	S	S	S		S		G	G	G	T	T							.	.	.	.	.	.	.	.	.	.	.	.	T	T			S										S		B			G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.													.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	M	D	P	M	L	D	M	M	G	M	Q	M	L	M	E	K	Y	G	D	Q	A	M	A	G	M	D	H	S	Q	M	M	G	H	M	G	H	G	N	M	N	H	M	N	H	G	G	K	F	D	F	H	H	A	N	K	I	N	G	Q	A	F	D	M	N	K	P	M	F	A	A	A	K	G	Q	Y	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	I	P	L	I	N	P	G	A	P	G	N	P	V	P	G	G	A	D	I	N	L	N	L	R	I	G	R	N	A	T	T	A	D	F	T	I	N	G	A	P	F	I	P	P	T	V	P	V	L	L	Q	I	L	S	G	V	T	N	P	N	D	L	L	P	G	G	A	V	I	S	L	P	A	N	Q	V	I	E
Template Known Secondary structure		G			B	S	S					S	S		S	S	T	T		S	S											S	S	S	S					S	S							S	S									T				G	G	G	S	S	S	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		W	V	I	S	G	V	G	D	M	M	L	H	P	F	H	I	H	G	T	Q	F	R	I	L	S	E	N	G	.	K	P	P	A	A	H	R	A	G	W	K	D	T	V	K	V	E	G	N	V	S	E	V	L	V	K	F	N	H	D	A	P	K	E	H	A	Y	M	A	H	C	H	L	L	E	H	E	D	T	G	M
Query Conservation																														.
Alig confidence							.	.	.																					.																																		.	.
Template Conservation							.	.	.																																																							.	.
Template Sequence		I	S	I	P	G	.	.	.	G	G	N	H	P	F	H	L	H	G	H	N	F	D	V	V	R	T	P	G	S	S	V	Y	N	Y	V	N	P	V	R	R	D	V	V	S	I	G	G	G	G	D	N	V	T	F	R	F	V	T	D	N	P	G	.	.	P	W	F	L	H	C	H	I	D	W	H	L	E	A	G	L
Template Known Secondary structure							.	.	.		B	S						S	S									T	T		S					S	S					S						B	S	S											S			.	.							S						T	T	T
Template Predicted Secondary structure							.	.	.																																																							.	.
Template SS confidence
		388	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		511	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	G	F	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	V	F	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.