Job Description P36649 Confidence 23.51% Date Thu Jan 5 11:53:29 GMT 2012 Rank 157 Aligned Residues 70 % Identity 19% Template c1qleB_ PDB info PDB header:oxidoreductase/immune system Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment Resolution 3.0 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																		.	.	.							.	.	.	.
Query SS confidence																																		.	.	.							.	.	.	.
Query Sequence		V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	E	E	T	T	L	H	W	H	G	L	E	V	P	G	.	.	.	E	V	D	G	G	P	.	.	.	.	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R
Query Conservation																																		.	.	.							.	.	.	.
Alig confidence																.	.	.						.	.	.								.	.	.							.	.	.	.																							.	.					.	.	.	.	.	.	.
Template Conservation																.	.	.						.	.	.																																											.	.					.	.	.	.	.	.	.
Template Sequence		V	V	V	P	V	G	K	K	V	L	V	Q	V	T	.	.	.	A	T	D	V	I	.	.	.	H	A	W	T	I	P	A	F	A	V	K	Q	D	A	V	P	G	R	I	A	Q	L	W	F	S	V	D	Q	E	G	V	Y	F	G	Q	C	S	E	L	C	G	I	.	.	N	H	A	Y	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S								.	.	.	B	S	S	S		.	.	.						T	T	T	T							T	T					B					S	S										S			S	T	.	.	T	S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.						.	.	.																																											.	.					.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	M	P	I	V	V	K	A	V	S	Q	E	K
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							227	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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