Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 27 Aligned Residues 277 % Identity 15% Template c1mzzC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:copper-containing nitrite reductase; PDBTitle: crystal structure of mutant (m182t)of nitrite reductase Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		S	A	L	P	L	W	S	R	A	V	F	A	A	E	R	P	T	L	P	I	P	D	L	L	T	T	D	A	R	N	R	I	Q	L	T	I	G	A	G	Q	S	T	F	.	G	G	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		S	N	L	P	R	V	K	H	T	L	V	P	P	P	F	A	H	A	H	E	Q	V	A	A	S	G	P	V	I	N	E	F	E	M	R	I	I	E	K	E	V	Q	L	D	E	D	A	Y	L	Q	A	M	T	F	D	G	S	I	P	G	P	L	M	I	V	H	E	G	D	Y	V	E	L	T	L	I	N	P	P	E
Template Known Secondary structure		T	T	S										T	T	S			S			S	S		S	S	S																			T	T									T	T	B	S	S								T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		2042	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.
		96			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure			.	.																																																				.
Query SS confidence			.	.																																																				.
Query Sequence		E	.	.	E	T	T	L	H	W	H	G	L	E	V	P	G	E	V	D	G	G	P	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	.	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L
Query Conservation			.	.																																																				.
Alig confidence			.	.													.	.																									.													.
Template Conservation																	.	.																									.
Template Sequence		N	T	M	P	H	N	I	D	F	H	A	A	T	G	A	.	.	L	G	G	G	G	L	T	L	I	N	P	G	E	K	V	V	L	R	F	K	A	T	R	A	.	G	A	F	V	Y	H	C	A	P	G	G	P	M	I	P	W	H	V	V	S	G	T	A	G	C	I	M	V	L	P	R	D	G	L	K	D	H	E
Template Known Secondary structure				S		B					T	T	S		S	G	.	.	G	G	G	G	G	G			B		T	T											S		.										S	G	G	G							T	T										T	T			B		T	T
Template Predicted Secondary structure																	.	.																									.
Template SS confidence
		2122	.	.	.	.	.	.	.	2130	.	.	.	.	.	.			.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160		.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.
		173	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.
Predicted Secondary structure						.																												.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence						.																												.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		P	K	Q	W	.	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A	D	G	Q	I	D	Y	Q	L	D	V	M	.	.	.	.	.	.	.	.	.	T	A	A	V	G	W	F	G	D	T	L	L	T	N	G	A	I	Y	P	Q	H	A	A	P	R	G	W	L	.	.	.	.	R	L	R	L	L	N	G
Query Conservation						.																												.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence						.																												.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	R	Y	D	T	V	Y	Y	I	G	E	S	D	H	Y	I	P	K	D	E	D	G	T	Y	M	R	F	S	D	P	S	E	G	Y	E	D	M	V	A	V	M	D	T	L	I	P	S	H	I	V	F	N	G	A	V	G	A	L	T	G	E	G	A	L	K	A	K	V	G	D	N	V	L	F	V	H	S
Template Known Secondary structure		S		B				S														B		T	T	S		B				S	S													T	T	T			S					T	T	S	T	T	T	T	S	G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		2199	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	V	K	.	V	S	E	L	P	V	L	M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T
Query Conservation																																	.
Alig confidence												.																					.
Template Conservation												.
Template Sequence		Q	P	N	R	D	S	R	P	H	L	.	I	G	G	H	G	D	L	V	W	E	T	G	K	F	H	N	A	P	E	R	D	L	E	T	W	F	I	R	G	G	T	A	G	A	A	L	Y	K	F	L	Q	P	G	V	Y	A	Y	V	N
Template Known Secondary structure			S	S	S		B					.		T	S		B	S				T	T			T	T	S			B		S	B	S				B		T	T											S
Template Predicted Secondary structure												.
Template SS confidence
		2279	2280	.	.	.	.	.	.	.	.		.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions