Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 12 Aligned Residues 447 % Identity 17% Template c1gycA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:laccase 2; PDBTitle: crystal structure determination at room temperature of a2 laccase from trametes versicolor in its oxidised form3 containing a full complement of copper ions Resolution 1.9 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.				.
Predicted Secondary structure																																																			.	.	.	.	.														.	.								.	.	.
Query SS confidence																																																			.	.	.	.	.														.	.								.	.	.
Query Sequence		R	I	Q	L	T	I	G	A	G	Q	S	T	F	G	G	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	.	.	.	.	.	E	E	T	T	L	H	W	H	G	L	E	V	P	.	.	G	E	V	D	G	G	P	.	.	.	Q
Query Conservation																																																			.	.	.	.	.														.	.								.	.	.
Alig confidence																																																			.	.	.	.	.														.	.								.	.	.
Template Conservation
Template Sequence		A	A	S	L	V	V	A	N	A	P	V	S	P	D	G	F	L	R	D	A	I	V	V	N	G	V	F	P	S	P	L	I	T	G	K	K	G	D	R	F	Q	L	N	V	V	D	T	L	T	N	H	T	M	L	K	S	T	S	I	H	W	H	G	F	F	Q	A	G	T	N	W	A	D	G	P	A	F	V	N	Q
Template Known Secondary structure														T	T	S									T	T	B	S	S								T	T														G	G	G		S		B						T				T	T		G	G	G	S			B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L	P	K	Q	W	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A	D	G	Q	I
Query Conservation
Alig confidence																														.	.	.	.																						.
Template Conservation																														.	.	.	.																						.
Template Sequence		C	P	I	A	S	G	H	S	F	L	Y	D	F	H	V	P	D	Q	A	G	T	F	W	Y	H	S	H	L	.	.	.	.	S	T	Q	Y	C	D	G	L	R	G	P	F	V	V	Y	D	P	K	D	P	H	.	A	S	R	Y	D	V	D	N	E	S	T	V	I	T	L	T	D	W	Y	H	T	A	A	R	L	G
Template Known Secondary structure				B		T	T										S	S											S	.	.	.	.	T	T	G	G	G	G	T										T	T		T	T	.	G	G	G		S	B		S	G	G	G									S	S		T	T	T	S
Template Predicted Secondary structure																														.	.	.	.																						.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure													.																				.
Query SS confidence													.																				.
Query Sequence		D	Y	Q	L	D	V	M	T	A	A	V	.	G	W	F	G	D	T	L	L	T	N	G	A	I	Y	P	Q	H	A	A	.	P	R	G	W	L	R	L	R	L	L	N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	V	K	V	S	E	L	P
Query Conservation													.																				.
Alig confidence													.																				.																							.																.
Template Conservation																																																								.																.
Template Sequence		P	R	F	P	L	G	A	D	A	T	L	I	N	G	L	G	R	S	A	S	T	P	T	A	A	L	A	V	I	N	V	Q	H	G	K	R	Y	R	F	R	L	V	S	I	S	C	D	P	N	Y	T	F	S	I	.	D	G	H	N	L	T	V	I	E	V	D	G	I	N	S	.	Q	P	L	L	V	D	S	I	Q
Template Known Secondary structure			S	S		S	S		S					T	T	B			B	T	T		T	T	S									T	T												S	S								.	T	T									T	T				.						S	B
Template Predicted Secondary structure																																																								.																.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T	L	P	V	S	Q	M	G	M	A	I	A	P	F	D	K	P	H	P	V	M	R	I	Q	P	I	A	I	S	A	S	G	A	L	P	D	T	L	S	S	L	P	A	L	P	S	L	E	G	L	T	V	R	K	L	Q	L	S
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	A	A	Q	R	Y	S	F	V	L	N	A	N	Q	T	V	G	N	Y	W	I	R	A	N	P	N	F	G	T	V	G	F	A	G	G	I	N	S	A	I	L	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	P	V	A	E	P	T	T	T	Q	T	T	S	V	I	P	L	I	E	T	N
Template Known Secondary structure				T	T											S		S	S									S	S	S	S		S		G	G	G	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S	S										S	S	B			G	G	G
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.														.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	P	M	L	D	M	M	G	M	Q	M	L	M	E	K	Y	G	D	Q	A	M	A	G	M	D	H	S	Q	M	M	G	H	M	G	H	G	N	M	N	H	M	N	H	G	G	K	F	D	F	H	H	A	N	K	I	N	G	Q	A	F	D	M	N	K	P	M	F	A	A	A	K	G	Q	Y	E	R	W	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	P	L	A	R	M	P	V	P	G	S	P	T	P	G	G	V	D	K	A	L	N	L	A	F	N	F	N	G	T	N	F	F	I	N	N	A	S	F	T	P	P	T	V	P	V	L	L	Q	I	L	S	G	A	Q	T	A	Q	D	L	L	P	A	G	S	V	Y	P	L	P	A	H	S	T	I	E	I	T	L
Template Known Secondary structure				B	S	S					S	S		S	S	T	T		S	S											S	S					T	T	B						S	S								T	T			S	T	T	T	S	S	S	T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		435	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.				.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																								.															.	.	.
Query SS confidence						.	.																								.															.	.	.
Query Sequence		S	G	V	G	.	.	D	M	M	L	H	P	F	H	I	H	G	T	Q	F	R	I	L	S	E	N	G	K	P	.	P	A	A	H	R	A	G	W	K	D	T	V	K	V	.	.	.	E	G	N	V	S	E	V	L	V	K	F	N	H	D	A	P	K	E	H	A	Y	M	A	H	C	H	L	L	E	H	E	D	T
Query Conservation						.	.																								.															.	.	.
Alig confidence						.	.																								.															.	.	.				.														.	.
Template Conservation																																																				.														.	.
Template Sequence		P	A	T	A	L	A	P	G	A	P	H	P	F	H	L	H	G	H	A	F	A	V	V	R	S	A	G	S	T	T	Y	N	Y	N	D	P	I	F	R	D	V	V	S	T	G	T	P	A	A	G	.	D	N	V	T	I	R	F	Q	T	D	N	P	G	.	.	P	W	F	L	H	C	H	I	D	F	H	L	E	A
Template Known Secondary structure					T	T	S		S		S						T	T									T	T						S	S	S					S							G	G	G	T	.											S			.	.							S	S						T
Template Predicted Secondary structure																																																				.														.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.
		509	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	M	L	G	F	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	A	I	V	F	A	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.