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Job DescriptionP36649
Confidence100.00%DateThu Jan 5 11:53:29 GMT 2012
Rank15Aligned Residues457
% Identity20%Templatec1asqB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ascorbate oxidase; PDBTitle: x-ray structures and mechanistic implications of three functional2 derivatives of ascorbate oxidase from zucchini: reduced-, peroxide-,3 and azide-forms
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90..... ....100....... ..110..... .
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Query Sequence  DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT. EETTLHWHGLEV. . PGEVDGGP. . . Q
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Template Sequence  SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ
Template Known Secondary structure 


TTSS
TTBSS


TT


SS

B
T


TT
GGGS

BTTTB
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQI
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Template Sequence  CAINPGETFFYNFTVDNP. GTFFYHGHL. . . . GMQRSAGLYGSLIVDPPQGKKEPFH. . . YDGEINLLLSDWWHQSIHKQ
Template Known Secondary structure 

B
TT


S
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S....TTGGGGT

STT


SS
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S
SS
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   81........90........ .100....... ..110.........120.........130.. .......140.........150..
 
   197..200.........210........ .220...... ...230.........240.........
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Query Sequence  DYQLDVMTAAVGWFGDTLLTNG. . . . . . . . . . . . . . . . . . . . . . . . . . AIYPQHAA. PRGWLRLRLLNGCNARSLNFATS
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Template Sequence  EVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAI.
Template Known Secondary structure  SSS




S
STTB

SSSBTTGGG
TTS
B



S
STTS



TT


SS
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   153......160.........170.........180.........190.........200.........210.........220.........230.
 
   250.........260.........270.........280.........290.........300.........310.........320.........
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Query Sequence  DNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGA
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Template Sequence  GNHQLLVVEADGNYV. QPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA. . . . RHPNTPPGLTLLNYLPNSVSKL
Template Known Secondary structure  TTB
TT.S
TT


S
TTS
S....S


S

TTS
TTS
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   232.......240...... ...250.........260.........270.........280.... .....290.........300......
 
   330.........340.........350.........360.........370.........380 .........
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Query Sequence  LPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMD. . . . . . . . . . . . . . . . . . . . HSQMMGHMG
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Template Sequence  PTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLH
Template Known Secondary structure 
SS






TT
TT

B
TTS



SS
STTTT


SS
TT
TT
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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   390.........400.........410.........420.........430........ .440.........450.........460...
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Query Sequence  HGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVG. . . . . DMMLHPFHIHGTQFRILSENGKPPA.
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Template Sequence  AFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA
Template Known Secondary structure  SS

S






TT

TTS



SS




TT




SSTT



SS

SS

G
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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   464.....470.........480.........490.........500.........510......
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Query Sequence  . . . . . . . AHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV
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Template Sequence  EEESSLNLKNPPLRNTVVIFPY. GWTAIRFVADNPG. . VWAFHCHIEPHLHMGMGVVFAE
Template Known Secondary structure  GGGGGS
SSS

S
TT.

S
..SSTT
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   467..470.........480........ .490.........500. ........510.........520...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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