Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 29 Aligned Residues 275 % Identity 16% Template c1aq8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrite reductase; PDBTitle: structure of alcaligenes faecalis nitrite reductase reduced2 with ascorbate Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		S	A	L	P	L	W	S	R	A	V	F	A	A	E	R	P	T	L	P	I	P	D	L	L	T	T	D	A	R	N	R	I	Q	L	T	I	G	A	G	Q	S	T	F	G	.	.	G	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		A	A	L	P	R	Q	K	V	E	L	V	D	P	P	F	V	H	A	H	S	Q	V	A	E	G	G	P	K	V	V	E	F	T	M	V	I	E	E	K	K	I	V	I	D	D	A	G	T	E	V	H	A	M	A	F	N	G	T	V	P	G	P	L	M	V	V	H	Q	D	D	Y	L	E	L	T	L	I	N	P	E
Template Known Secondary structure		T	T	S										T	T	S						S	B		S	S	S																		S	T	T										T	T		S	S								T	T											T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		95	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		T	E	.	.	E	T	T	L	H	W	H	G	L	E	V	P	G	E	V	D	G	G	P	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L
Query Conservation				.	.
Alig confidence				.	.														.	.																								.
Template Conservation																			.	.																								.
Template Sequence		T	N	T	L	M	H	N	I	D	F	H	A	A	T	G	A	L	.	.	G	G	G	G	L	T	E	I	N	P	G	E	K	T	I	L	R	F	K	A	T	K	P	.	G	V	F	V	Y	H	C	A	P	P	G	M	V	P	W	H	V	V	S	G	M	N	G	A	I	M	V	L	P	R	E	G	L	H	D	G	K
Template Known Secondary structure		T			S		B					T	T			S	G	G	.	.	G	G	G	G	G			B		T	T											S		.										T	T							T	T	T										T	B					T	T
Template Predicted Secondary structure																			.	.																								.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		173	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure						.																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence						.																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		P	K	Q	W	.	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A	D	G	Q	I	D	Y	Q	L	D	V	M	T	.	.	.	.	.	.	.	.	.	A	A	V	G	W	F	G	D	T	L	L	T	N	G	A	I	Y	P	.	.	.	.	.	.	Q	H	A	A	P	R	G	W	L	R	L	R	L	L
Query Conservation						.																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence						.																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.								.	.
Template Conservation																																																																											.	.
Template Sequence		G	K	A	L	T	Y	D	K	I	Y	Y	V	G	E	Q	D	F	Y	V	P	R	D	E	N	G	K	Y	K	K	Y	E	A	P	G	D	A	Y	E	D	T	V	K	V	M	R	T	L	T	P	T	H	V	V	F	N	G	A	V	G	A	L	T	G	D	K	A	M	T	A	A	V	G	E	.	.	K	V	L	I	V
Template Known Secondary structure		S						S														B		T	T	S		B				S	S	G	G	G	G									T	T	T			S					T	T	B	T	T	T	T	S	G	G	G						T	T		.	.
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	.	V	K	V	S	E	L	P	V	L	M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T
Query Conservation																																	.
Alig confidence														.																			.
Template Conservation														.
Template Sequence		H	S	Q	A	N	R	D	T	R	P	H	L	.	I	G	G	H	G	D	Y	V	W	A	T	G	K	F	N	T	P	P	D	V	D	Q	E	T	W	F	I	P	G	G	A	A	G	A	A	F	Y	T	F	Q	Q	P	G	I	Y	A	Y	V	N
Template Known Secondary structure					S	S	S		B					.		T	S							T	T		B	T	T	S							S	S			B		T	T											S
Template Predicted Secondary structure														.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions