Job Description P36649 Confidence 100.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 14 Aligned Residues 450 % Identity 20% Template c1a65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: type-2 cu-depleted laccase from coprinus cinereus Resolution 2.23 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.				.	.
Predicted Secondary structure																																																		.	.	.	.	.													.	.									.	.	.
Query SS confidence																																																		.	.	.	.	.													.	.									.	.	.
Query Sequence		I	Q	L	T	I	G	A	G	Q	S	T	F	G	G	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	.	.	.	.	.	E	E	T	T	L	H	W	H	G	L	E	V	.	.	P	G	E	V	D	G	G	P	.	.	.	Q	G
Query Conservation																																																		.	.	.	.	.													.	.									.	.	.
Alig confidence																										.																								.	.	.	.	.													.	.									.	.	.
Template Conservation																										.
Template Sequence		D	T	M	T	L	T	N	A	N	V	S	P	D	G	F	T	R	A	G	I	L	V	N	G	.	V	H	G	P	L	I	R	G	G	K	N	D	N	F	E	L	N	V	V	N	D	L	D	N	P	T	M	L	R	P	T	S	I	H	W	H	G	L	F	Q	R	G	T	N	W	A	D	G	A	D	G	V	N	Q	C
Template Known Secondary structure													T	T	S									T	T	.	B	S	S							T	T														T	T	S			S	B						T				T	T		G	G	G	S			B	T	T	T	B
Template Predicted Secondary structure																										.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	P	P	G	G	K	R	S	V	T	L	N	V	D	Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D	D	E	I	L	K	L	M	L	P	K	Q	W	G	I	D	D	V	P	V	I	V	Q	D	K	K	F	S	A	D	G	Q	I	D
Query Conservation
Alig confidence																													.	.	.	.																											.
Template Conservation																													.	.	.	.																											.
Template Sequence		P	I	S	P	G	H	A	F	L	Y	K	F	T	P	A	G	H	A	G	T	F	W	Y	H	S	H	F	.	.	.	.	G	T	Q	Y	C	D	G	L	R	G	P	M	V	I	Y	D	D	N	D	P	H	A	A	L	Y	D	.	E	D	D	E	N	T	I	I	T	L	A	D	W	Y	H	I	P	A	P	S	I	Q
Template Known Secondary structure			B		T	T										T	T											S	.	.	.	.	T	T	G	G	G	G	T										T	T		T	T	G	G	G		S	.	B		S	G	G	G									S	S		G	G	G
Template Predicted Secondary structure																													.	.	.	.																											.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Y	Q	L	D	V	M	T	A	A	V	G	W	F	G	D	T	L	L	T	N	G	A	I	Y	P	Q	H	A	A	.	P	R	G	W	L	R	L	R	L	L	N	G	C	N	A	R	S	L	N	F	A	T	S	D	N	R	P	L	Y	V	I	A	S	D	G	G	L	L	P	E	P	V	K	V	S	E	L	P	V	L
Query Conservation																															.
Alig confidence																															.																							.																.
Template Conservation																																																						.																.
Template Sequence		G	A	A	Q	P	D	A	T	L	I	N	G	K	G	R	Y	V	G	G	P	A	A	E	L	S	I	V	N	V	E	Q	G	K	K	Y	R	M	R	L	I	S	L	S	C	D	P	N	W	Q	F	S	I	.	D	G	H	E	L	T	I	I	E	V	D	G	E	L	T	.	E	P	H	T	V	D	R	L	Q	I	F
Template Known Secondary structure		S	S				S					T	T	B			B	T	T													T	T												S	S								.	T	T									T	T				.						S	B
Template Predicted Secondary structure																																																						.																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	E	R	F	E	V	L	V	E	V	N	D	N	K	P	F	D	L	V	T	L	P	V	S	Q	M	G	M	A	I	A	P	F	D	K	P	H	P	V	M	R	I	Q	P	I	A	I	S	A	S	G	A	L	P	D	T	L	S	S	L	P	A	L	P	S	L	E	G	L	T	V	R	K	L	Q	L	S	M	D
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		T	G	Q	R	Y	S	F	V	L	D	A	N	Q	P	V	D	N	Y	W	I	R	A	Q	P	N	K	G	R	N	G	L	A	G	T	F	A	N	G	V	N	S	A	I	L	R	Y	A	G	A	A	N	A	D	P	T	T	S	A	N	P	N	P	A	Q	L	.	.	.	.	.	.	.	.	.	N	E	A	D	L	H
Template Known Secondary structure		T	T											S		S	S									S			G	G	G	G	G	G			G	G	G	T	T							T	T	S		S	S								S	S			B		.	.	.	.	.	.	.	.	.		G	G	G		B
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.										.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	L	D	M	M	G	M	Q	M	L	M	E	K	Y	G	D	Q	A	M	A	G	M	D	H	S	Q	M	M	G	H	M	G	H	G	N	M	N	H	M	N	H	G	G	K	F	D	F	H	H	A	N	K	I	N	G	Q	A	F	D	M	N	K	P	M	F	A	A	A	K	G	Q	Y	E	R	W	V	I	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	D	P	A	A	P	G	I	P	T	P	G	A	A	D	V	N	L	R	F	Q	L	G	F	S	G	G	R	F	T	I	N	G	T	A	Y	E	S	P	S	V	P	T	L	L	Q	I	M	S	G	A	Q	S	A	N	D	L	L	P	A	G	S	V	Y	E	L	P	R	N	Q	V	V	E	L	V	V	P	A
Template Known Secondary structure		B	S	S	S		S		S	S		S	S	T	T		S	S											S	S	S				T	T	B						S	S								T	T			S	G	G	G	S	S	S	T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	G	D	M	M	L	H	P	F	H	I	H	G	T	Q	F	R	I	L	S	E	N	.	G	K	P	P	A	A	H	R	A	G	W	K	D	T	V	K	V	E	G	N	V	S	E	V	L	V	K	F	N	H	D	A	P	K	E	H	A	Y	M	A	H	C	H	L	L	E	H	E	D	T	G	M	M	L	G	F	T
Query Conservation																								.
Alig confidence																								.																																			.	.
Template Conservation																																																											.	.
Template Sequence		G	V	L	G	G	P	H	P	F	H	L	H	G	H	A	F	S	V	V	R	S	A	G	S	S	T	Y	N	F	V	N	P	V	K	R	D	V	V	S	L	G	V	T	G	D	E	V	T	I	R	F	V	T	D	N	P	G	.	.	P	W	F	F	H	C	H	I	E	F	H	L	M	N	G	L	A	I	V	F	A
Template Known Secondary structure			S	T	T								T	T									T	T						S	S	S	B				S						S	T	T											S			.	.							S	S					T	T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		516
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		468