Return to main results Retrieve Phyre Job Id

Job DescriptionP43533
Confidence1.62%DateThu Jan 5 12:02:23 GMT 2012
Rank97Aligned Residues15
% Identity47%Templatec2zkqm_
PDB info PDB header:ribosomal protein/rnaChain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution8.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124. ....130........
Predicted Secondary structure 

.












Query SS confidence 

.












Query Sequence  GQ. TSTTHRGGKKISI
Query Conservation 
 .       

 
  
Alig confidence 

.












Template Conservation 











  

Template Sequence  GQHTKTTGRRGRTVGV
Template Known Secondary structure 


SSSS

SSS



Template Predicted Secondary structure 















Template SS confidence 















   133......140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions