Job Description P43533 Confidence 1.99% Date Thu Jan 5 12:02:23 GMT 2012 Rank 64 Aligned Residues 83 % Identity 12% Template c1nafA_ PDB info PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain Resolution 2.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																										.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	H	L	S	M	G	Q	I	N	G	S	Q	L	Q	W	I	T	E	Q	K	S	S	L	L	A	T	L	D	Y	L	E	Q	L	R	R	K	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	N	S	V	D	I	S	Q	R	W	Q	E	I	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.									.	.	.	.
Template Sequence		A	R	L	L	K	S	S	.	.	H	P	E	D	L	R	A	A	.	.	.	.	N	K	L	I	K	E	X	V	Q	E	D	Q	K	R	X	E	K	I	S	K	R	V	N	A	I	E	E	V	N	N	N	V	K	L	L	T	E	X	V	X	S	H	S	Q	G	S	S	E	D	L	X	K	E	L	Y	Q	R	C	E
Template Known Secondary structure						S	S		.	.	S	T	T						.	.	.	.																																										T	T	T				T	T
Template Predicted Secondary structure									.	.									.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.			.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		81	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		V	K	T	Q	Q	L	R	Q	M	N	Q	.	.	.	H	N	G	W	L	L	E	G	Q	I	E	R	N	Q	Q	A	L	E	M	L	K	P	H
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		R	X	R	P	T	L	F	R	L	A	S	D	T	E	D	N	D	E	A	L	A	E	I	L	Q	A	N	D	N	L	T	Q	V	I	N	L	Y
Template Known Secondary structure		T														S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions