Job Description P06961 Confidence 97.32% Date Thu Jan 5 10:59:31 GMT 2012 Rank 12 Aligned Residues 159 % Identity 13% Template d2qgsa1 SCOP info HD-domain/PDEase-like HD-domain/PDEase-like HD domain Resolution 2.00

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		229	230	.	.	.	.	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		G	I	H	T	L	M	T	L	S	M	A	A	M	.	.	.	.	.	.	L	S	P	Q	V	D	V	R	F	A	T	L	C	H	D	L	G	K	G	L	T	P	P	E	L	W	P	R	H	H	G	H	G	P	A	G	V	K	L	V	E	Q	L	C	Q	R	L	R	V	P	N	E	I	R	D	L	A	R	L	V	A
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.
Template Sequence		I	A	H	V	E	R	V	Y	N	N	A	C	Y	I	A	K	R	E	N	I	T	D	T	L	V	I	E	L	S	S	L	L	H	D	T	V	D	S	.	.	.	.	.	.	.	.	.	K	L	T	D	E	I	L	A	Y	D	Q	L	K	Q	F	L	S	T	L	D	L	S	S	E	I	S	Q	Q	V	L	Y	I	I
Template Known Secondary structure																			T	T		S												T	T	T	T			.	.	.	.	.	.	.	.	.	S	S	S															T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.										.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.														.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	H	D	L	I	H	T	F	P	M	L	N	P	K	T	I	V	K	L	F	D	S	I	D	A	W	R	K	P	Q	R	V	E	Q	L	A	L	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	V	R	G	R	T	G	F	E	S	A	D	Y	P	Q	G	R	W	L	R	E	A	W	E	V
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		K	H	X	S	H	.	.	.	V	K	L	S	I	D	G	E	I	V	R	D	A	D	R	L	D	A	I	G	A	I	G	I	A	R	T	F	Q	F	S	G	H	F	G	E	P	X	W	T	E	T	K	L	S	N	E	E	L	H	T	S	L	V	E	E	L	D	N	S	A	I	K	H	F	Y	E	K	L	F	K	L
Template Known Secondary structure			T	T			.	.	.																	T	T	S																T			S												T	S	G	G	G	G	G	S											T	G	G	G	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		98	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	V	P	T	K	A	V	V	E	A	G	F	K	G	V	E	I	R	E	E	L	T	R	R	R	I	A	A	V	A	S	W	K	E	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		K	D	L	X	H	T	P	T	.	.	.	.	.	.	.	A	K	K	L	A	E	E	R	H	Q	F	X	I	Q	Y	L	K	Q	F	X	S	E
Template Known Secondary structure		G	G	G			S			.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions