Return to main results Retrieve Phyre Job Id

Job DescriptionP06961
Confidence4.84%DateThu Jan 5 10:59:31 GMT 2012
Rank99Aligned Residues71
% Identity17%Templated1y2ka1
SCOP infoHD-domain/PDEase-like HD-domain/PDEase-like PDEase
Resolution1.36

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210........ .220..... ....230.........240...... ...250...
Predicted Secondary structure 



..






..





............
Query SS confidence 




























. .






. .




















. . . . . . . . . . . .






Query Sequence  PQVFFQVLRDCGALRVLFPEIDALFGVPA. . PAKWHPE. . IDTGIHTLMTLSMAAMLSPQV. . . . . . . . . . . . DVRFATL
Query Conservation         
                     ..       ..     


             ............ 
 



Alig confidence 




























..






..




















............






Template Conservation        

    
     
    
  

  
   
   




  

 

 
    

        
   
  






Template Sequence  TVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASA
Template Known Secondary structure  TTTT

TS
TT
SSSST
GGGTTTS
Template Predicted Secondary structure 



















Template SS confidence 















































































   119120.........130.........140.........150.........160.........170.........180.........190........
 
   254.....260
Predicted Secondary structure 





Query SS confidence 






Query Sequence  CHDLGKG
Query Conservation 





 
Alig confidence 






Template Conservation   


 

Template Sequence  IHDVDHP
Template Known Secondary structure  TTTT

Template Predicted Secondary structure 




Template SS confidence 






   199200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions