Job Description P06961 Confidence 99.97% Date Thu Jan 5 10:59:31 GMT 2012 Rank 10 Aligned Residues 212 % Identity 18% Template d1vfga1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 2.80

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		120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	L	R	H	V	S	P	.	A	F	G	E	D	P	L	R	V	L	R	V	A	R	F	A	A	R	Y	A	H	L	G	F	R	I	A	D	E	T	L	A	L	M	R	E	M	T	H	A	G	E	L	E	H	L	T	P	E	R	V	W	K	E	T	E	S	A	L	T	T	R	N	P	Q	V	F	F	Q	V	L	R
Query Conservation									.
Alig confidence									.																				.	.	.
Template Conservation																													.	.	.
Template Sequence		V	I	R	V	L	H	P	V	S	F	I	E	D	P	V	R	I	L	R	A	L	R	F	A	G	R	L	.	.	.	N	F	K	L	S	R	S	T	E	K	L	L	K	Q	A	V	N	L	G	L	L	K	E	A	P	R	G	R	L	I	N	E	I	K	L	A	L	R	E	D	R	F	L	E	I	L	E	L	Y	R
Template Known Secondary structure			B			S	S	T	T						T	T													.	.	.	T			B														T	T	G	G	G	T	S																S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	G	A	L	R	V	L	F	P	E	I	D	A	L	F	G	V	P	A	P	A	K	W	H	P	E	I	D	T	G	I	H	T	L	M	T	L	S	M	A	A	M	L	S	P	Q	V	D	V	R	F	A	T	L	C	H	D	L	G	K	G	L	T	P	P	E	L	W	P	R	H	H	G	H	G	P	A	G	V
Query Conservation
Alig confidence																																				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	R	V	L	E	E	I	I	E	G	F	Q	W	N	E	K	V	L	Q	K	L	Y	A	L	R	K	V	V	D	W	H	A	L	.	.	.	.	E	F	S	E	E	R	I	D	Y	G	W	L	Y	L	L	I	L	I	S	N	L	D	Y	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T						S	T	T																								.	.	.	.		G	G	G	S															S			S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		K	L	V	E	Q	L	C	Q	R	L	R	V	P	N	E	I	R	D	L	A	R	L	V	A	E	F	H	D	L	I	H	T	F	.	.	P	M	L	N	P	K	T	I	V	K	L	F	D	S	I	D	A	W	R	K	P	Q	R	V	E	Q	L	A	L	T	S	E	A	D	V	R	G	R	T	G	F	E	S	A	D
Query Conservation																																			.	.
Alig confidence		.	.																																.	.																.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation		.	.																																																	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		.	.	G	K	H	F	L	E	E	M	S	A	P	S	W	V	R	E	T	Y	K	F	M	K	F	K	L	G	S	L	K	E	E	L	K	K	A	K	E	N	Y	E	V	Y	R	L	L	K	P	L	.	.	.	.	.	.	.	H	T	S	V	L	L	L	L	.	.	.	.	.	.	.	.	M	L	E	E	E	L	K
Template Known Secondary structure		.	.	T							T	T																								T	T		S	S	S	T					T	T	G	G	G	.	.	.	.	.	.	.	G	T							.	.	.	.	.	.	.	.	T	T	S	G	G	G
Template Predicted Secondary structure		.	.																																																	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
				273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320								.	.	.	.	.	.	.	.									.	330	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	Q	G	R	W	L	R	E	A	W	E	V	A	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	K	L	Y	L	E	K	L	R	K	V	K	L	P
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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