Job Description P06961 Confidence 99.95% Date Thu Jan 5 10:59:31 GMT 2012 Rank 11 Aligned Residues 155 % Identity 23% Template d1ou5a1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 3.40

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		120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure									.	.	.																											.	.	.
Query SS confidence									.	.	.																											.	.	.
Query Sequence		L	L	R	H	V	S	P	.	.	.	A	F	G	E	D	P	L	R	V	L	R	V	A	R	F	A	A	R	Y	A	H	L	G	F	R	I	.	.	.	A	D	E	T	L	A	L	M	R	E	M	T	H	A	G	E	L	E	H	L	T	P	E	R	V	W	K	E	T	E	S	A	L	T	T	R	N	P	Q	V	F
Query Conservation									.	.	.																											.	.	.
Alig confidence									.	.	.																			.	.	.						.	.	.											.	.
Template Conservation																														.	.	.																			.	.
Template Sequence		K	V	R	F	V	G	H	A	K	Q	R	I	Q	E	D	Y	L	R	I	L	R	Y	F	R	F	Y	G	R	.	.	.	I	V	D	K	P	G	D	H	D	P	E	T	L	E	A	I	A	E	.	.	N	A	K	G	L	A	G	I	S	G	E	R	I	W	V	E	L	K	K	I	L	V	G	N	H	V	N	H	L
Template Known Secondary structure						S	S	T	T	T	T	T	S	S	S		T	T												.	.	.	S		S	S	S	S													.	.	S		T	T	G	G	G	S		S												T	S	T	T
Template Predicted Secondary structure																														.	.	.																			.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	V	L	R	D	C	G	A	L	R	V	L	F	P	E	I	D	A	L	F	G	V	P	A	P	A	K	W	H	P	E	I	D	T	G	I	H	T	L	M	T	L	S	M	A	A	M	L	S	P	Q	V	D	V	R	F	A	T	L	C	H	D	L	G	K	G	L	T	P	P	E	L	W	P	R	H	H	G	H
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	H	L	I	Y	D	L	D	V	A	P	Y	I	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	A	S	L	E	E	F	D	K	V	S	K	N	V	D	G	F	S	P	K	P	V	T	L	L	A	S	L	F	K	V	Q	D	D	V	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T		G	G	G	G	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S													T	T	S									G	G	G			S	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	A	G	V	K	L	V	E	Q	L	C	Q	R	L	R	V	P	N	E	I	R	D	L	A	R	L	V	A	E	F	H	D	L	I	H	T	F	P	M	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	L	D	L	R	L	K	I	A	K	E	E	K	N	L	G	L	F	I	V	K	N	R	K	D	L	I	K	A	T	D	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.										T	T									T	T	T	T	T	T	T	S				S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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