Job Description P06961 Confidence 86.64% Date Thu Jan 5 10:59:31 GMT 2012 Rank 26 Aligned Residues 96 % Identity 25% Template c3u1nC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 Resolution 3.10 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	V	L	R	D	C	G	A	L	R	V	L	F	P	E	I	D	A	L	F	G	V	P	A	P	A	K	W	H	P	E	I	D	T	G	I	H	T	L	M	T	L	S	M	A	A	M	L	S	P	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	A	T	L	C	H	D	L	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	Y	I	K	Q	L	G	G	G	Y	Y	V	F	P	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	R	F	E	H	S	L	G	V	G	Y	L	A	G	C	L	V	H	A	L	G	E	K	Q	P	E	L	Q	I	S	E	R	D	V	L	C	V	Q	I	A	G	L	C	H	D	L	G
Template Known Secondary structure		G	G	G	S	B	T	T	G	G	G	T	T	T		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.		B																								G	G	G																	T	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.															.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		259	260	.	.										.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.											290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	L	T	.	.	.	.	.	.	.	.	.	P	P	E	L	W	P	R	H	H	G	H	G	P	A	G	V	K	L	V	E	Q	L	C	Q	R	L	R	.	.	.	.	.	.	.	.	.	.	V	P	N	E	I	R	D	L	A	R	L	V	A	E
Query Conservation						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	P	F	S	H	X	F	D	G	R	F	I	P	L	A	R	P	E	V	K	W	T	H	E	Q	G	S	V	X	X	F	E	H	L	I	N	S	N	G	I	K	P	V	X	E	Q	Y	G	L	I	P	E	E	D	I	C	F	I	K	E	Q	I	V
Template Known Secondary structure			B	T	T	B						T							T	T	S																			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions