Job Description P06961 Confidence 7.36% Date Thu Jan 5 10:59:31 GMT 2012 Rank 80 Aligned Residues 113 % Identity 9% Template c3ljvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m Resolution 2.60 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		R	N	P	Q	V	F	F	Q	V	L	R	D	C	G	A	L	R	V	L	F	P	E	I	D	A	L	F	G	V	P	A	P	A	K	W	H	P	E	I	D	T	G	I	H	T	L	M	T	L	S	M	A	A	M	L	.	.	.	.	S	P	Q	V	D	V	R	F	A	T	L	C	H	D	L	G	K	G	L	T	P
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		A	S	V	I	D	A	I	D	L	V	G	L	P	A	V	R	Q	F	A	L	S	L	S	L	I	D	A	H	R	E	G	R	C	E	A	F	D	Y	A	A	Y	W	Q	K	S	L	A	R	A	V	A	L	Q	S	I	T	A	Q	A	V	A	P	K	E	A	F	T	L	G	L	L	A	D	V	G	R	L	A	L	A
Template Known Secondary structure			S																		T	T					T	S	S		T	T			T	T	S																		T	T	G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.																		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	L	W	P	R	H	H	G	H	G	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	L	V	E	Q	L	C	Q	R	L	R	V	P	N	E	I	R	D	L	A	R	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	W	P	E	E	Y	S	E	C	L	R	K	A	D	G	E	A	L	I	A	L	E	R	E	R	F	A	T	D	H	D	E	L	T	R	X	L	L	T	D	W	G	F	P	Q	V	F	I	D	A	L	Q	L
Template Known Secondary structure											T	T	S	S			T												S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions