Return to main results Retrieve Phyre Job Id

Job DescriptionP31574
Confidence97.84%DateThu Jan 5 11:48:20 GMT 2012
Rank23Aligned Residues116
% Identity17%Templated1ybha1
SCOP infoDHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain Pyruvate oxidase and decarboxylase, middle domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.... ...200.........210.........220.........230.........240. ........250.. .......260
Predicted Secondary structure 

.















.





.........
Query SS confidence 




.












































.










. . . . . . . . .







Query Sequence  LDKAR. LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHE. RYVGISNLMLK. . . . . . . . . PELYLAVG
Query Conservation 
  
 .


  


    
       

  


 

 


 
 
 

 
  . 


 

  
 .........
 



 
Alig confidence 




.












..


















...







.










.........







Template Conservation 
  






 
 
   
 ..  
  


  



  
  ... 
          
  
          
  




 

Template Sequence  ISESKKPVLYVGGGCLNSS. . DELGRFVELTGIPVASTLM. . . GLGSYPDDELSLHMLGMHGTVYANYAVEHSDLLLAFG
Template Known Secondary structure 
SS
GGGTT
..



TT...TTTS



TT
STTS

SS
Template Predicted Secondary structure 





..





...






















Template SS confidence 















































































   296...300.........310.... .....320.........330... ......340.........350.........360.........370
 
   261........270... ......280.........290. ........300.........310..
Predicted Secondary structure 




...








.



Query SS confidence 












. . .

















.




















Query Sequence  ISGQIQHMVGANA. . . SQTIFAINKDKNAPIFQY. ADYGIVGDAVKILPALTAALA
Query Conservation 



 

  

  ...
  




 
  



  .





 
   


 
   
 
Alig confidence 












...

















.




















Template Conservation                     

 

 
          
  
  
    
  
   
 
Template Sequence  VRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKVLE
Template Known Secondary structure 



SSGGGTTTTSS
TTTTTSSS

SS
Template Predicted Secondary structure 




























Template SS confidence 























































   372.......380.........390.........400.........410.........420.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions