Return to main results Retrieve Phyre Job Id

Job DescriptionP31574
Confidence96.59%DateThu Jan 5 11:48:20 GMT 2012
Rank37Aligned Residues116
% Identity15%Templatec2v3wC_
PDB info PDB header:lyaseChain: C: PDB Molecule:benzoylformate decarboxylase; PDBTitle: crystal structure of the benzoylformate decarboxylase2 variant l461a from pseudomonas putida
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210.........220.........230.........240. ........250.. .......260.....
Predicted Secondary structure 
















..





........



Query SS confidence 













































. .










. . . . . . . .












Query Sequence  RLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHE. . RYVGISNLMLK. . . . . . . . PELYLAVGISGQI
Query Conservation   


  


    
       

  


 

 


 
 
 

 
  .. 


 

  
 ........
 



 




 
Alig confidence 

































.

.







..










........












Template Conservation 



  
           
  


 
  

  
 .  .         
   
            
   
 

 

     
Template Sequence  NPAIVLGPDVDAANANADCVMLAERLKAPVWVAP. SA. PRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFR
Template Known Secondary structure  S

TT
TT


S.S
.SB

S
TTSTT

S
TT
SSS
TT
Template Predicted Secondary structure 











.

.



























Template SS confidence 















































































   202.......210.........220.........230..... .. ..240.........250.........260.........270.........
 
   266...270 .........280.........290.........300.........310...
Predicted Secondary structure  ....















Query SS confidence 




. . . .










































Query Sequence  QHMVG. . . . ANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
Query Conservation 

  
....
  
  




 
  



  





 
   


 
   
 
Alig confidence 




....










































Template Conservation                  
 
                  
    
  
   
  
Template Sequence  YHQYDPGQYLKPGTRLISVTCDPLEAARAPMGDAIVADIGAMASALANLVEE
Template Known Secondary structure 

S


S
SS
SS
S

SSSS
S

Template Predicted Secondary structure 























Template SS confidence 



















































   280.........290.........300.........310.........320.........330.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions