 |
Job Description | P31574 | Confidence | 90.05% | Date | Thu Jan 5 11:48:20 GMT 2012 |
Rank | 59 | Aligned Residues | 58 |
% Identity | 16% | Template | c2hjhB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:nad-dependent histone deacetylase sir2; |
PDBTitle: crystal structure of the sir2 deacetylase
|
Resolution | 1.85 Å |
|
 |
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | |
|
|
|
. | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | E | L | Y | L | A | V | G | I | S | G | Q | I | Q | H | M | V | G | . |
. |
. |
. |
A | N | A | S | Q | T | I | F | A | I | N | K | D | K | N | A | P | I | F | Q | Y | A | D | Y | G | I | V | G | D | A | V | K | I | L | P | A | L | T | A | A | L |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |   |
| . | . | . | . |
|   |   |
|   |   |
|
|
|
|
|   |
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
E | C | D | L | L | I | C | I | G | T | S | L | K | V | A | P | V | S | E | I | V | N | X | V | P | S | H | V | P | Q | V | L | I | N | R | D | P | V | K | . |
. |
H | A | E | F | D | L | S | L | L | G | Y | C | D | D | I | A | A | X | V | A | Q | K | C |
Template Known Secondary structure |   |
 |
|
|  |  |  |  |  | S |
|
|
|
|  |  | T | G | G | G |  |  |  |  | S |
| T | T | S |
|  |  |  |  |  | S | S |
|
| T | . | . | T |
|
|
| S |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
463 | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | |
|
. | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|