Return to main results Retrieve Phyre Job Id

Job DescriptionP31574
Confidence97.47%DateThu Jan 5 11:48:20 GMT 2012
Rank28Aligned Residues113
% Identity19%Templatec2djiA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210.........220.........230.........240.. .......250... ......260....
Predicted Secondary structure 
















..






.........


Query SS confidence 














































. .










. . . . . . . . .










Query Sequence  RLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHER. . YVGISNLMLKP. . . . . . . . . ELYLAVGISGQ
Query Conservation   


  


    
       

  


 

 


 
 
 

 
   ..


 

  
 
......... 



 




Alig confidence 













..


















...








..










.........










Template Conservation 




 
 
   
 ..  
  


    

  
  ...  
          
  
      
   
  

 

 

    
Template Sequence  RPVIYAGIGTMGHG. . PAVQELARKIKAPVITTGK. . . NFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFP
Template Known Secondary structure  S
GGGTT
..T


TT...
GGGS
TT
TTB


SSSSS

SS


T
Template Predicted Secondary structure 






..






...




























Template SS confidence 















































































   209210.........220.. .......230.........240. ........250.........260.........270.........280...
 
   265....270. ........280....... ..290.........300.........310...
Predicted Secondary structure  .









.





Query SS confidence 






.















.

























Query Sequence  IQHMVGA. NASQTIFAINKDKNAP. IFQYADYGIVGDAVKILPALTAALAR
Query Conservation   

  

.  
  




 
  

.

  





 
   


 
   
 
Alig confidence 






.















.

























Template Conservation                
 

 
             
  
    
  
      
Template Sequence  FSEVEGTFRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDA
Template Known Secondary structure  TTTTTTTTTT
SS
GGGTTSSS

SS
S

Template Predicted Secondary structure 























Template SS confidence 


















































   284.....290.........300.........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions