Job Description P31574 Confidence 100.00% Date Thu Jan 5 11:48:20 GMT 2012 Rank 9 Aligned Residues 173 % Identity 17% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		5	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure														.	.	.	.	.												.	.	.	.																.	.	.
Query SS confidence														.	.	.	.	.												.	.	.	.																.	.	.
Query Sequence		S	Q	V	W	V	F	S	D	T	P	S	R	.	.	.	.	.	L	P	E	L	M	N	G	A	Q	A	L	.	.	.	.	A	N	Q	I	N	T	F	V	L	N	D	A	D	G	A	.	.	.	Q	A	I	Q	L	G	A	N	H	V	W	K	L	N	G	K	P	D	D	R	M	I	E	D	Y	A	G	V	M	A
Query Conservation														.	.	.	.	.												.	.	.	.																.	.	.
Alig confidence														.	.	.	.	.												.	.	.	.																.	.	.																			.
Template Conservation																																																																						.
Template Sequence		S	K	I	L	V	I	A	E	H	R	R	N	D	L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	D	K	V	V	V	A	V	I	G	S	Q	A	D	A	F	V	P	A	L	S	V	N	G	V	D	E	L	V	V	V	K	G	S	S	I	.	D	F	D	P	D	V	F	E	A	S	V
Template Known Secondary structure												T	T				T											T	T		S	S	T	T									S	T	T	G	G	G	G						B	T	T		S								S		S	.	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	T	I	R	Q	H	G	A	D	G	L	V	L	L	P	N	T	R	R	G	K	L	L	A	A	K	L	G	Y	R	L	K	A	A	V	S	N	D	A	S	T	V	S	V	Q	D	G	K	A	T	V	K	H	M	V	Y	G	G	L	A	I	G	E	E	R	I	A	.	T	P	Y	A	V	L	T	I	S	S	G	T
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		S	A	L	I	A	A	H	N	P	S	V	V	L	L	P	H	S	V	D	S	L	G	Y	A	S	S	L	A	S	K	T	G	Y	G	F	A	T	D	V	Y	I	V	E	Y	Q	G	D	E	L	V	A	T	R	G	G	Y	N	Q	K	V	N	V	E	V	D	F	P	G	K	S	T	V	V	L	T	I	R	P	S	V
Template Known Secondary structure											S							S					T	T							T	T	T														T	T									T	T	T	T								T	T		S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	A	Q	P	D	A	S	R	T	G	E	T	H	T	V	E	W	Q	A	P	A	V	A	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	P	L	E	G	A	G	S	P	V	V	S	N	V	D	A	P	S	V	Q	S	R	S	Q	N	K
Template Known Secondary structure		S					S	B																S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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