Return to main results Retrieve Phyre Job Id

Job DescriptionP31574
Confidence95.89%DateThu Jan 5 11:48:20 GMT 2012
Rank43Aligned Residues104
% Identity14%Templatec1jscA_
PDB info PDB header:lyaseChain: A: PDB Molecule:acetohydroxy-acid synthase; PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT
Query Conservation 


  


    
       

  


 

 


 
 
 

 
   


 

  
 
 



 




 

  

  
  
Alig confidence 

































...








..........























Template Conservation 

  
            
  


    

  
  ...         ..........
   
  
          
  

 
Template Sequence  VLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQ. . . GLGSFDQED. . . . . . . . . . PKSLDMLGMHGCATANLAVQNADL
Template Known Secondary structure 
GGGGSSTTTT


TT...TTTSS
TTS..........TT
STTS

S
Template Predicted Secondary structure 










...








..........














Template SS confidence 















































































   303......310.........320.........330...... ...340..... ....350.........360.........
 
   277..280 .........290 .........300.........310...
Predicted Secondary structure  .................................





.





Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .









.






















Query Sequence  IFAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKDKNAPIFQ. YADYGIVGDAVKILPALTAALAR
Query Conservation 



.................................
 
  



 . 





 
   


 
   
 
Alig confidence 



.................................









.






















Template Conservation 

 

  
                          
 
                
  
    
  
   
  
Template Sequence  IIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIFP
Template Known Secondary structure  S



SSGGGSSTTS
S
GGGTTSSS

SS
GGGS

Template Predicted Secondary structure 










































Template SS confidence 






































































   370.........380.........390.........400.........410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions