Job Description P31574 Confidence 100.00% Date Thu Jan 5 11:48:20 GMT 2012 Rank 1 Aligned Residues 298 % Identity 31% Template c1efpC_ PDB info PDB header:electron transport Chain: C: PDB Molecule:protein (electron transfer flavoprotein); PDBTitle: electron transfer flavoprotein (etf) from paracoccus2 denitrificans Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																											.	.						.
Query SS confidence													.	.	.	.	.	.																											.	.						.
Query Sequence		Q	V	W	V	F	S	D	T	P	S	R	.	.	.	.	.	.	L	P	E	L	M	N	G	A	Q	A	L	A	N	Q	I	N	T	F	V	L	N	D	A	D	G	A	.	.	Q	A	I	Q	L	.	G	A	N	H	V	W	K	L	N	G	K	P	D	D	R	M	I	E	D	Y	A	G	V	M	A	D	T	I	R
Query Conservation													.	.	.	.	.	.																											.	.						.
Alig confidence													.	.	.	.	.	.																											.	.						.
Template Conservation
Template Sequence		A	V	L	L	L	G	E	V	T	N	G	A	L	N	R	D	A	T	A	K	A	V	A	A	V	K	A	L	G	D	V	T	V	L	C	A	G	A	S	A	K	A	A	A	E	E	A	A	K	I	A	G	V	A	K	V	L	V	A	E	D	A	L	Y	G	H	R	L	A	E	P	T	A	A	L	I	V	G	L	A
Template Known Secondary structure									B	S	S	S		B													G	G	G	S									T	T										T	S	T	T										G	G	G	T	T														G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	G	A	D	G	L	V	L	L	P	N	T	R	R	G	K	L	L	A	A	K	L	G	Y	R	L	K	A	A	V	S	N	D	A	S	T	V	S	V	Q	D	G	K	A	T	V	K	H	M	V	Y	G	G	L	A	I	G	E	E	R	I	A	T	P	Y	A	V	L	T	I	S	S	G	T	F	D	A	A	Q
Query Conservation
Alig confidence				.	.																																							.	.	.
Template Conservation				.	.																																							.	.	.
Template Sequence		G	D	.	.	Y	S	H	I	A	A	P	A	T	T	D	A	K	N	V	M	P	R	V	A	A	L	L	D	V	M	V	L	S	D	V	S	A	I	L	D	A	D	.	.	.	T	F	E	R	P	I	Y	A	G	N	A	I	Q	V	V	K	S	K	D	A	K	K	V	F	T	I	R	T	A	S	F	D	A	A	G
Template Known Secondary structure		G	G	.	.		S						S	S														T	T								S				S	S	S	.	.	.							G	G	G	T									S	S	S							G	G	G	S
Template Predicted Secondary structure				.	.																																							.	.	.
Template SS confidence
		82	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	S	R	T	G	E	T	H	T	V	E	W	Q	A	P	A	V	A	I	T	R	T	A	T	Q	A	R	Q	S	N	S	V	D	L	D	K	A	R	L	V	V	S	V	G	R	G	I	G	S	K	E	N	I	A	L	A	E	Q	L	C	K	A	I	G	A	E	L	A	C	S	R	P	V	A	E	N	E	K
Query Conservation
Alig confidence		.	.																																																																											.
Template Conservation		.	.																																																																											.
Template Sequence		.	.	E	G	G	T	A	P	V	T	E	T	A	A	A	A	D	P	G	L	S	S	W	V	A	D	E	V	A	E	S	D	R	P	E	L	T	S	A	R	R	V	V	S	G	G	R	G	L	G	S	K	E	S	F	A	I	I	E	E	L	A	D	K	L	G	A	A	V	G	A	S	R	A	A	V	.	D	S	G
Template Known Secondary structure		.	.	S																S													S	S			G	G	G		S							G	G	G		S	T	T	T	T											T											.		T	T
Template Predicted Secondary structure		.	.																																																																											.
Template SS confidence
				157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	E	H	E	R	Y	V	G	I	S	N	L	M	L	K	P	E	L	Y	L	A	V	G	I	S	G	Q	I	Q	H	M	V	G	A	N	A	S	Q	T	I	F	A	I	N	K	D	K	N	A	P	I	F	Q	Y	A	D	Y	G	I	V	G	D	A	V	K	I	L	P	A	L	T	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	P	N	D	W	Q	V	G	Q	T	G	K	V	V	A	P	E	L	Y	V	A	V	G	I	S	G	A	I	Q	H	L	A	G	M	K	D	S	K	V	I	V	A	I	N	K	D	E	E	A	P	I	F	Q	I	A	D	Y	G	L	V	G	D	L	F	S	V	V	P	E	L	T	G	K	L
Template Known Secondary structure		S	S		G	G	G	B	B	S	S	S	S	B					S						S									T	T	T	T	T		S							S		T	T		G	G	G	G	T		S					S												T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions