Return to main results Retrieve Phyre Job Id

Job DescriptionP45807
Confidence1.18%DateThu Jan 5 12:03:50 GMT 2012
Rank79Aligned Residues16
% Identity50%Templated1efnb_
SCOP infoRegulatory factor Nef Regulatory factor Nef Regulatory factor Nef
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20..
Predicted Secondary structure 
Query SS confidence 















Query Sequence  PDDVKLAVDLIVLLEE
Query Conservation 
 








 


 
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Template Conservation    


  

 





Template Sequence  PMTYKAAVDLSHFLKE
Template Known Secondary structure 


Template Predicted Secondary structure 


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   78.80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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