Job Description P43337 Confidence 98.24% Date Thu Jan 5 12:02:19 GMT 2012 Rank 82 Aligned Residues 83 % Identity 23% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	L	L	L	T	Q	R	S	I	H	L	R	K	H	A	G	Q	V	A	F	P	G	G	A	V	D	D	T	D	A	S	A	I	A	A	A	L	R	E	A	E	E	E	V	A	I	P	P	S	A	V	E	V	I	G	V	L	P	P	V	D	S	V	T	G	Y	Q	V	T	P	V	V	G	I	I	P	P	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence									.	.	.	.	.	.																																												.	.	.	.	.	.	.															.	.	.
Template Conservation									.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		S	V	L	M	Q	M	R	.	.	.	.	.	.	F	D	G	L	L	G	F	P	G	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L	G	L	G	L	R	L	T	E	A	D	Y	L	S	S	H	L	.	.	.	.	.	.	.	T	R	V	V	A	H	L	Y	A	R	Q	L	T	L	E	Q	L
Template Known Secondary structure									.	.	.	.	.	.	T	T	S					S						T	T	T										S			S						G	G	G							.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
								122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	L	P	Y	R	A	S	E	D	E	V	S	A	V	F	E	M	P	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	V	E	I	S	A	V	H	S	R	D	H	G	L	E	V	L	G	L	V	R	V	P	L
Template Known Secondary structure										T	S	T	T	B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions