Return to main results Retrieve Phyre Job Id

Job DescriptionP43337
Confidence99.76%DateThu Jan 5 12:02:19 GMT 2012
Rank14Aligned Residues109
% Identity19%Templatec3h95A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 6; PDBTitle: crystal structure of the nudix domain of nudt6
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  AVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASAIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQV
Query Conservation 



 
       


  
        
   



  
  
     

 

  

 

       

 
          
Alig confidence 



















...


















.





























......
Template Conservation   
   
       

  
  ...    
 
  


 

 


.   

 

  




               ...... 
Template Sequence  GVAGAVFDESTRKILVVQDR. . . NKLKNMWKFPGGLSEPEED. IGDTAVREVFEETGIKSEFRSVLSIRQQHD. . . . . . M
Template Known Secondary structure  TTTTS...SSSTTSBB



TT

.





......
Template Predicted Secondary structure 




...













.




......
Template SS confidence 















































































   145....150.........160.... .....170.........180... ......190.........200.........210... .
 
   113......120.........130.........140.........150.
Predicted Secondary structure 


















Query SS confidence 






































Query Sequence  TPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHP
Query Conservation   
 
              

    



  

       
Alig confidence 






































Template Conservation                    
     
    

        
Template Sequence  YIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTP
Template Known Secondary structure  S






TTT
SSB
Template Predicted Secondary structure 

















Template SS confidence 






































   224.....230.........240.........250.........260..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions