 |
Job Description | P43337 | Confidence | 99.72% | Date | Thu Jan 5 12:02:19 GMT 2012 |
Rank | 31 | Aligned Residues | 105 |
% Identity | 24% | Template | c2w4eA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:mutt/nudix family protein; |
PDBTitle: structure of an n-terminally truncated nudix hydrolase2 dr2204 from deinococcus radiodurans
|
Resolution | 2.00 Å |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | H | R | Q | A | A | V | L | I | P | I | V | R | R | P | Q | P | G | L | L | L | T | Q | R | S | I | H | L | R | K | H | A | G | Q | V | A | F | P | G | G | A | V | D | D | T | D | A | S | A | I | A | A | A | L | R | E | A | E | E | E | V | A | I | P | P | S | A | V | E | V | I | G | V | L | P | P | V | D | S | V |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   | . |   |   |   |
|
|
|   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
| . |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | R | G | P | R | A | V | F | I | L | P | V | T | A | . |
Q | G | E | A | V | L | I | R | Q | F | R | Y | . |
P | L | R | A | T | I | T | E | I | V | A | G | G | V | E | K | G | E | D | . |
L | G | A | A | A | A | R | E | L | L | E | E | V | G | G | A | A | S | E | W | V | P | L | P | G | F | Y | P | Q | P | S | I |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  | T | . | T | S |  |  |  |  |  |  |  |  |  | T | . | T | T | T |  |  |  |  |  |
|  |  |  |  |
|
| T | T |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
| S |  |  |  |  |
|
|
| B |
| S |
| T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | Y | Q | V | T | P | V | V | G | I | I | P | P | D | L | P | Y | R | A | S | E | D | E | V | S | A | V | F | E | M | P | L | A | Q | A |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
Template Sequence |   |
S | G | V | V | F | Y | P | L | L | A | L | G | V | . |
. |
. |
. |
. |
. |
. |
. |
T | L | G | T | I | E | R | V | V | L | P | L | A | E | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|