Return to main results Retrieve Phyre Job Id

Job DescriptionP77188
Confidence95.93%DateThu Jan 5 12:26:12 GMT 2012
Rank19Aligned Residues89
% Identity15%Templated1mspa_
SCOP infoImmunoglobulin-like beta-sandwich PapD-like MSP-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920...... ...30.. .......40.........50.........60.........70.........80.........90....
Predicted Secondary structure 
.

...





























Query SS confidence 







.





. . .





























































Query Sequence  QALDVGDI. SSFMNS. . . DSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIR
Query Conservation   

 
 
 .      ...        
 
       
 
 
                    





   
 

  
 

Alig confidence 







.





...






















...............























Template Conservation    
 
 
   
 
  
     
  
 
 
 
   






...............
    
 
 
  


 
     
 
Template Sequence  GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKT. . . . . . . . . . . . . . . TNMRRLSVDPPCGVLDPKEKVLMA
Template Known Secondary structure 

SSS
S

SS



SSS
...............S
TTTS

TT
Template Predicted Secondary structure 















...............










Template SS confidence 















































































   7..10.........20.........30.........40....... ..50.........60.........70.
 
   95....100....... ..110.........120..
Predicted Secondary structure 







....







Query SS confidence 












. . . .














Query Sequence  FFYKGPADEKERY. . . . YRIVWFDQALSDAQR
Query Conservation 
         
  ....


    

      
Alig confidence 












....














Template Conservation 

             


 
     
      
Template Sequence  VSCDTFNAATEDLNNDRITIEWTNTPDGAAKQ
Template Known Secondary structure 



GGGS

SS


TT

SS
Template Predicted Secondary structure 

















Template SS confidence 































   72.......80.........90.........100...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions