Job Description P77188 Confidence 7.42% Date Thu Jan 5 12:26:12 GMT 2012 Rank 91 Aligned Residues 86 % Identity 12% Template c3qnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		G	D	I	S	S	F	M	N	S	D	S	S	T	L	S	K	T	I	K	N	S	T	D	S	G	R	L	I	N	I	R	L	E	R	L	S	S	P	L	D	D	G	Q	V	I	S	M	D	K	P	D	E	L	L	L	T	P	A	S	L	L	L	P	A	Q	A	S	E	V	I	R	F	F	Y	K	G	P	.	A	D
Query Conservation																																																																															.
Alig confidence																																	.	.	.	.																																											.
Template Conservation																																	.	.	.	.
Template Sequence		G	T	T	K	V	E	I	T	A	S	Q	P	T	S	T	I	I	L	H	S	H	H	L	Q	I	S	R	A	T	L	R	.	.	.	.	K	G	L	S	E	E	P	L	Q	V	L	E	H	P	R	Q	E	Q	I	A	L	L	A	P	E	P	L	L	V	G	L	P	Y	T	V	V	I	H	Y	A	G	N	L	S	E
Template Known Secondary structure											S	S											S										.	.	.	.														G	G	G	T												B	T														B	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		103	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	E	R	Y	Y	R	I	V	W	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	H	G	F	Y	K	S	T	Y	R
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions