Return to main results Retrieve Phyre Job Id

Job DescriptionP77188
Confidence47.21%DateThu Jan 5 12:26:12 GMT 2012
Rank38Aligned Residues74
% Identity16%Templatec3cfuA_
PDB info PDB header:lipoproteinChain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70 .........80.........90.........100.........110....
Predicted Secondary structure 















..


















Query SS confidence 

































. .











































Query Sequence  LSKTIKNSTDSGRLINIRLERLSSPLDDGQVISM. . DKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFD
Query Conservation      
 
       
 
 
               ..     





   
 

  
 


         
  


    
Alig confidence 

































..








...




















.









Template Conservation 
 


 
 
 
        
 
 
 

  
            
  ...
 
 

 



 








. 
   
 
 
Template Sequence  IEVTXENIGEDSISYNFIGFDLRDKNDQSVRPVFSIEEKGRILXG. . . GTLVSGKKVTGVLSYVIPKGE. QKHYTLVYNP
Template Known Secondary structure 
SSS
GGG
TT

B



STTTTTB

...
TT
STT
.GGG

Template Predicted Secondary structure 





















...









.

Template SS confidence 















































































   113......120.........130.........140.........150....... ..160.........170........ .180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions