Return to main results Retrieve Phyre Job Id

Job DescriptionP77188
Confidence5.51%DateThu Jan 5 12:26:12 GMT 2012
Rank100Aligned Residues89
% Identity11%Templatec2l0dA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:cell surface protein; PDBTitle: solution nmr structure of putative cell surface protein ma_4588 (272-2 376 domain) from methanosarcina acetivorans, northeast structural3 genomics consortium target mvr254a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100.........110.........120....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDN
Query Conservation        
 
 
                    





   
 

  
 


         
  


    

        
Alig confidence 




































































...







Template Conservation   
   

 
 
 
 
   
    
     
    
  
  
  
 
 

          
   
 
 

...  
 
 
 
Template Sequence  PNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVD. . . PENAVNEG
Template Known Secondary structure  TTS
SSS
B

TTS
B
BT



S
S
...TT
SS

S
Template Predicted Secondary structure 

































...



Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80..... ....90...
 
   125....130......
Predicted Secondary structure 




Query SS confidence 











Query Sequence  ANRSAVATASAR
Query Conservation        
 
   
Alig confidence 











Template Conservation   
 

  
  
 
Template Sequence  NESNNTLTALVG
Template Known Secondary structure  SGGGS
Template Predicted Secondary structure 



Template SS confidence 











   94.....100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions