Job Description P77188 Confidence 99.97% Date Thu Jan 5 12:26:12 GMT 2012 Rank 2 Aligned Residues 171 % Identity 11% Template c2co7B_ PDB info PDB header:fibril protein Chain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii) Resolution 1.8 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	Q	A	L	D	V	G	D	I	S	S	F	M	N	S	D	S	S	T	L	S	K	T	I	K	N	S	T	D	S	G	R	L	I	N	I	R	L	E	R	L	S	S	P	L	D	D	G	Q	V	I	S	M	D	K	P	D	E	L	L	L	T	P	A	S	L	L	L	P	A	Q	A	S	E	V	I	R	F
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	L	F	S	V	K	L	G	A	T	R	V	I	Y	H	A	G	T	A	G	A	T	L	S	V	S	N	P	Q	N	Y	P	I	L	V	Q	S	S	V	K	A	A	D	K	S	S	P	A	.	.	.	.	.	.	.	.	.	.	P	F	L	V	M	P	P	L	F	R	L	E	A	N	Q	Q	S	Q	L	R	I
Template Known Secondary structure										S		S						T	T	S	S										S	S	S											T	T	S	S	S	B		.	.	.	.	.	.	.	.	.	.	S					S	S						T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		96	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.												.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure							.	.																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	K	G	P	.	.	A	D	E	K	E	R	Y	Y	R	I	V	W	F	D	Q	A	L	S	D	A	Q	R	D	N	A	N	R	S	A	V	A	T	A	S	A	R	I	G	T	I	L	V	V	A	P	R	.	.	.	.	.	.	.	.	.	.	.	Q	A	N	Y	H	F	Q	Y	A	N	G	S	L	T	N	T
Query Conservation							.	.																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	G	G	D	M	P	T	D	R	E	T	L	Q	W	V	C	I	K	A	V	P	P	E	T	L	D	.	.	.	.	.	.	.	.	.	L	N	L	S	I	N	A	C	D	K	L	I	F	R	P	D	A	V	K	G	T	P	E	D	V	A	G	N	L	R	W	V	E	T	G	N	K	L	K	V	E	N	P
Template Known Secondary structure										S	S	S																		.	.	.	.	.	.	.	.	.																T	T	S		S						G	G	G							T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	A	T	L	R	I	L	A	Y	G	P	C	L	K	A	A	N	G	K	E	C	K	E	N	Y	Y	L	M	P	G	K	S	R	R	F	T	R	V	D	T	A	D	N	K	G	R	V	A	L	W	Q	G
Query Conservation
Alig confidence														.	.	.	.	.																					.	.	.	.	.
Template Conservation														.	.	.	.	.																					.	.	.	.	.
Template Sequence		T	P	F	Y	M	N	L	A	S	V	T	V	.	.	.	.	.	G	G	K	P	I	T	G	L	E	Y	V	P	P	F	A	D	K	T	L	N	.	.	.	.	.	H	G	D	I	E	W	R	V	I	T	D
Template Known Secondary structure		S	S	S		B								.	.	.	.	.	T	T									B		T	T							.	.	.	.	.									B		T
Template Predicted Secondary structure														.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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