Job Description P77188 Confidence 99.97% Date Thu Jan 5 12:26:12 GMT 2012 Rank 1 Aligned Residues 172 % Identity 16% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	Q	A	L	D	V	G	D	I	S	S	F	M	N	S	D	S	S	T	L	S	K	T	I	K	N	S	T	D	S	G	R	L	I	N	I	R	L	E	R	L	S	S	P	L	D	D	G	Q	V	I	S	M	D	K	P	D	E	L	L	L	T	P	A	S	L	L	L	P	A	Q	A	S	E	V	I	R	F
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	.	.	.	.	.	.	.	.	.	.	.	.	K	E	K	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I
Template Known Secondary structure										S	S	S						T	T		S										S	S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S						T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		96	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.										.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure							.	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	K	G	P	.	.	A	D	E	K	E	R	Y	Y	R	I	V	W	F	D	Q	A	L	S	D	A	Q	R	D	N	A	N	R	S	A	V	A	T	A	S	A	R	I	G	T	I	L	V	V	A	P	R	Q	A	.	.	.	.	.	.	.	.	.	N	Y	H	F	Q	Y	A	N	G	S	L	T	N	T	G	N
Query Conservation							.	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																						.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		A	Q	A	G	G	V	F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	V	G	V	.	.	.	.	.	.	.	.	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P
Template Known Secondary structure					S					S	S	S																		.	.	.	.	.	.	.	.																	T	T	S		S		G	G	G	T	G	G	G							T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	R	I	L	A	Y	G	P	C	L	K	A	A	N	G	K	E	C	K	E	N	Y	Y	L	M	P	G	K	S	R	R	F	T	R	V	D	T	A	D	N	K	G	R	V	A	L	W	Q	G
Query Conservation
Alig confidence																					.	.	.	.																.	.	.	.
Template Conservation																					.	.	.	.																.	.	.	.
Template Sequence		S	P	F	Y	M	N	I	G	E	L	T	F	G	G	K	S	I	P	S	.	.	.	.	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	R	.	.	.	.	N	V	S	W	R	I	I	N	D
Template Known Secondary structure		S	S	S										T	T						.	.	.	.					T	T										.	.	.	.							B		T
Template Predicted Secondary structure																					.	.	.	.																.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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