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Job DescriptionP77188
Confidence96.64%DateThu Jan 5 12:26:12 GMT 2012
Rank18Aligned Residues84
% Identity13%Templatec1z9oB_
PDB info PDB header:protein binding/lipid binding proteinChain: B: PDB Molecule:vesicle-associated membrane protein-associated protein a; PDBTitle: 1.9 angstrom crystal structure of the rat vap-a msp homology domain in2 complex with the rat orp1 ffat motif
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  LDVGD. ISSFMNS. . . DSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFF
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Template Sequence  LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKT. . . . . . . . . . . . . . . TAPRRYCVRPNSGVIDPGSIVTVSVM
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   8.10.........20.........30.........40...... ...50.........60.........70..
 
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Query Sequence  Y. . . . KGPADEKERYYRIVWFDQALSD
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Template Sequence  LQPFDYDPNEKSKHKFMVQTIFAPPSD
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   73......80.........90.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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