Return to main results Retrieve Phyre Job Id

Job DescriptionP37016
Confidence99.72%DateThu Jan 5 11:54:26 GMT 2012
Rank10Aligned Residues128
% Identity16%Templatec3bwuF_
PDB info PDB header:chaperone, structural, membrane proteinChain: F: PDB Molecule:protein fimf; PDBTitle: crystal structure of the ternary complex of fimd (n-terminal domain,2 fimdn) with fimc and the n-terminally truncated pilus subunit fimf3 (fimft)
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  NSTCKSGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDFRALSGVMAAGSRQIFAN
Query Conservation    

 
       
 

 
                    


 
  
                    
            
Alig confidence 









.................






























.......














Template Conservation     
 
    .................
  

       
 
 
  
      
   
....... 
             
Template Sequence  DNGCSVAAES. . . . . . . . . . . . . . . . . TNFIGATTPVVPFRILLSPCGNAVSAVKVGF. . . . . . . TGVADSHNANLLALE
Template Known Secondary structure 




.................





B



TT

.......

B
SS
TTS

Template Predicted Secondary structure 




.................















.......









Template SS confidence 















































































   13......20.. .......30.........40.........50... ......60........
 
   120.........130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 




































Query SS confidence 














































































Query Sequence  EISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSDDMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE
Query Conservation       
 



 
                                    
 
 
        

 
   
 


 
 

Alig confidence 























.....





























..

















Template Conservation       
 



 
    
  
   .....                  
   
 
     .. 

 
   
  

 
 

Template Sequence  NTVSAASGLGIQLLNEQQNQIPLN. . . . . APSSALSWTTLTPGKPNTLNFYARLMATQV. . PVTAGHINATATFTLEYQ
Template Known Secondary structure 

TTB
BS
TT

B

TT.....

GGG



TTS
SSS..S
B

B





Template Predicted Secondary structure 











.....













..



Template SS confidence 














































































   83......90.........100...... ...110.........120.........130...... ...140.........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions