Job Description P45568 Confidence 98.52% Date Thu Jan 5 12:03:20 GMT 2012 Rank 45 Aligned Residues 205 % Identity 19% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		M	T	R	F	A	L	T	G	L	A	G	Y	I	A	P	R	H	L	K	A	I	K	E	V	G	G	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	.	.	.	P	E	A	E	F	F	T
Template Known Secondary structure										T	T	S	S	S											T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S				G	G	G	G	G	T		.	.	.	T	T					S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																										.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.
		81	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																																.	.	.	.	.																													.
Query SS confidence												.	.	.	.	.																																.	.	.	.	.																													.
Query Sequence		G	Q	Q	A	A	C	D	M	A	A	.	.	.	.	.	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	.	.	.	.	.	L	A	N	K	E	S	L	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	L	P	V	.
Query Conservation												.	.	.	.	.																																.	.	.	.	.																													.
Alig confidence												.	.	.	.	.																																.	.	.	.	.								.	.	.	.																		.
Template Conservation																																																												.	.	.	.
Template Sequence		E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A	S	P	N	H	L	H	Y	P	Q	I	R	M	A	L	R	L	G	A	N	A	L	S	E	K	P	L	V	L	W	P	E	E	I	.	.	.	.	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V	L
Template Known Secondary structure																T	T				S						S		G	G	G											T	T							S	S	S		S						.	.	.	.											T
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	D	S	E	H	N	A	I	F	Q	S	L	P	Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A	T	M
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		Q	L	R	V	H	P	S	L	L	A	L	K	E	R	L	G	Q	E	.	.	.	.	.	.	.	.	.	.	K	G	A	K	D	V	V	L	T	Y	V	T	G	R	G	K	W	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	W	K	V	D	E	A	.	.	K	S	G	G	L	A
Template Known Secondary structure		G	G	G	G													T		.	.	.	.	.	.	.	.	.	.		S														G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	G	G	G				.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																		.	.	.	.	170	.	.	.			.	.	.	.	.	.
		226	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		M	N	K	.	G	L	E	Y	I	E	A	R	W	L	F	N	A	S	A	S	Q	M	E	V	L	I	H	P	Q	S	V	I	H	S	M	V	R	Y	Q	D	G	S	V
Query Conservation					.
Alig confidence					.													.
Template Conservation																		.
Template Sequence		T	N	I	G	I	H	F	F	D	L	L	A	W	L	F	G	.	R	A	L	H	V	E	V	H	A	R	T	P	T	V	N	A	G	Y	L	E	L	E	G	A	R	V
Template Known Secondary structure				T	T													.												S	S									T	T
Template Predicted Secondary structure																		.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions