Job Description P45568 Confidence 99.04% Date Thu Jan 5 12:03:20 GMT 2012 Rank 21 Aligned Residues 209 % Identity 15% Template c3moiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of the putative dehydrogenase from bordetella2 bronchiseptica rb50 Resolution 2.50 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																		.
Query SS confidence				.																		.
Query Sequence		M	K	.	Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	.	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V
Query Conservation				.																		.
Alig confidence				.								.										.								.								.																		.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																		.								.																		.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	R	F	G	I	C	G	L	.	G	F	A	G	S	V	L	M	A	P	A	M	R	H	H	P	D	.	A	Q	I	V	A	A	C	.	D	P	N	E	D	V	R	E	R	F	G	K	E	Y	G	I	P	.	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												.	S					T	T									T	T	.								.		S													T			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																		.								.																		.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.
Predicted Secondary structure																																																	.																									.	.	.	.	.
Query SS confidence																																																	.																									.	.	.	.	.
Query Sequence		L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	A	N	K	.	E	S	L	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	L	P	V	.	.	.	.	.	D	S	E
Query Conservation																																																	.																									.	.	.	.	.
Alig confidence		.	.	.	.																																												.																									.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	T	L	A	E	M	M	Q	H	V	Q	M	D	A	V	Y	I	A	S	P	H	Q	F	H	C	E	H	V	V	Q	A	S	E	Q	G	L	H	I	I	V	E	K	P	L	T	L	S	R	D	E	A	D	R	M	I	E	A	V	E	R	A	G	V	H	L	V	V	G	T	S	R	S	H	D	P	V
Template Known Secondary structure		.	.	.	.	S	S								S			S						S		G	G	G											T	T							S				S																T									G	G	G	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		H	N	A	I	F	Q	S	L	P	Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A	T	M	M	N	K	G	L	.	E
Query Conservation																																																																																.
Alig confidence													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.											.
Template Conservation													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		V	R	T	L	R	A	I	V	Q	E	G	.	.	.	.	.	.	.	.	.	.	S	V	G	R	V	S	M	L	N	C	F	N	Y	T	D	F	L	Y	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	P	E	E	L	D	T	S	K	.	.	G	G	G	I	I	Y	N	Q	L	P	H	Q
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	T	T														G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	G		G	G	G	.	.	T		S					T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		Y	I	E	A	R	W	L	F	N	A	S	A	S	Q	M	E	V	L	I	H	P	Q	S	.	.	.	.	.	.	.	V	I	H	S	M	V	R	Y	Q	D	G	S	V
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	S	I	K	T	I	T	G	Q	R	I	T	A	V	R	A	M	T	G	R	L	D	P	K	R	P	T	E	G	N	C	A	A	M	L	T	L	E	D	G	A	C
Template Known Secondary structure																									T	T	S		S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions