Job Description P45568 Confidence 98.79% Date Thu Jan 5 12:03:20 GMT 2012 Rank 27 Aligned Residues 203 % Identity 15% Template c3m2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum Resolution 2.30 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																.
Query SS confidence				.	.																.
Query Sequence		M	K	.	.	Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	.	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E
Query Conservation				.	.																.
Alig confidence				.	.								.								.										.								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																		.								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	L	I	K	V	G	L	V	G	I	.	G	A	Q	X	Q	E	N	L	L	P	S	L	L	Q	X	Q	D	.	I	R	I	V	A	A	C	.	D	S	D	L	E	R	A	R	R	V	H	R	F	I	S	D	I	P	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													.	S						T							T		T	T	.								.		S	S					G	G	G	G	G	T	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																		.								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.																												.	.	.
Query SS confidence																																															.	.	.	.	.																												.	.	.
Query Sequence		V	L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	.	.	.	.	.	A	N	K	E	S	L	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	L	P	V	.	.	.
Query Conservation																																															.	.	.	.	.																												.	.	.
Alig confidence		.	.	.	.	.																																									.	.	.	.	.			.	.	.	.																						.	.	.
Template Conservation		.	.	.	.	.																																																.	.	.	.
Template Sequence		.	.	.	.	.	D	N	V	P	A	X	L	N	Q	V	P	L	D	A	V	V	X	A	G	P	P	Q	L	H	F	E	X	G	L	L	A	X	S	K	G	V	N	V	F	V	E	K	P	P	C	A	T	.	.	.	.	L	E	E	L	E	T	L	I	D	A	A	R	R	S	D	V	V	S	G	V	G	X	N	F
Template Known Secondary structure		.	.	.	.	.	S	S								S			S						S															T	T							S		S		S	S	.	.	.	.															T
Template Predicted Secondary structure		.	.	.	.	.																																																.	.	.	.
Template SS confidence
							56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	S	E	H	N	A	I	F	Q	S	L	P	Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A	T	M	M	N
Query Conservation		.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	A	R	P	V	R	Q	L	R	E	X	T	Q	V	D	.	.	.	.	.	.	.	.	.	.	E	F	G	E	T	L	H	I	Q	L	N	H	Y	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	R	A	P	L	W	G	L	D	S	T	L	R	S	F	L	L	A
Template Known Secondary structure															T	S	G	.	.	.	.	.	.	.	.	.	.	G	G														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			T	T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		228	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure									.																			.	.	.
Query SS confidence									.																			.	.	.
Query Sequence		K	G	L	E	Y	I	E	.	A	R	W	L	F	N	A	S	A	S	Q	M	E	V	L	I	H	P	.	.	.	Q	S	V	I	H	S	M	V	R	Y	Q	D	G	S	V
Query Conservation									.																			.	.	.
Alig confidence									.																			.	.	.
Template Conservation
Template Sequence		Q	A	I	H	T	I	D	L	A	I	T	F	G	D	G	E	L	R	R	V	Q	S	S	V	Q	R	H	D	D	A	L	I	V	R	A	D	X	A	F	S	S	G	A	T
Template Known Secondary structure		T														S													T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions