 |
Job Description | P45568 | Confidence | 97.25% | Date | Thu Jan 5 12:03:20 GMT 2012 |
Rank | 116 | Aligned Residues | 108 |
% Identity | 16% | Template | c3h9eA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule: |
PDBTitle: crystal structure of human sperm-specific glyceraldehyde-3-phosphate2 dehydrogenase (gapds) complex with nad and phosphate
|
Resolution | 1.72 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | T | I | L | G | S | T | G | S | I | G | C | S | T | L | D | V | V | R | H | N | P | E | H | F | R | V | V | A | L | V | A | . |
G | K | N | V | T | R | M | V | E | Q | C | L | . |
. |
. |
. |
. |
. |
E | F | S | P | R | Y | A | V | M | D | D | E | A | S | A | K | L | L | K | T | M | L | Q | Q | Q | G | S | R |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|
|
|
|
|
| . |   |   |
|   |   |   |
|   |
|
|   |   | . | . | . | . | . | . |   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . |
|
|
|
|
|
|   |
|   |
|
|
|   |   | . | . |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|   |   |
Template Sequence |   |
T | V | G | I | N | G | . |
F | G | R | I | G | R | L | V | L | R | A | C | M | E | . |
. |
K | G | V | K | V | V | A | V | N | D | P | F | I | D | P | E | Y | M | V | Y | M | F | K | Y | D | S | T | H | G | R | Y | K | G | S | V | E | F | R | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | Q | L | V | V | D | N | H | E |
Template Known Secondary structure |   |
 |  |  |  |  |
| . |
| S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
|  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |
|
| T | T | T |
| S |
| S | S |
|  |  |  |  | T | . | . | . | . | . | . | . | . | . | T |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|