Job Description P45568 Confidence 90.59% Date Thu Jan 5 12:03:20 GMT 2012 Rank 341 Aligned Residues 108 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		M	K	Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	.	.	.	.	.	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R
Query Conservation																																								.	.	.	.	.
Alig confidence											.																													.	.	.	.	.													.	.	.	.	.	.																		.
Template Conservation											.																																														.	.	.	.	.	.																		.
Template Sequence		I	K	K	I	G	V	L	G	M	.	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	G	E	S	P	L	K	.	.	.	.	.	.	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	.	K
Template Known Secondary structure											.	S	T	T											S	T	T												T	T	T	T	T						T	T	T				S	S	.	.	.	.	.	.			G	G	G											T	T	.
Template Predicted Secondary structure											.																																														.	.	.	.	.	.																		.
Template SS confidence
		18	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	V	L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		F	E	C	T	P	D	F	S	R	I	S	.	.	.	.	.	.	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D	F	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L
Template Known Secondary structure						S		G	G	G	G	G	.	.	.	.	.	.	G		S												S	S			S	S																			T	T
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions