Job Description P45568 Confidence 98.84% Date Thu Jan 5 12:03:20 GMT 2012 Rank 25 Aligned Residues 206 % Identity 11% Template c3e9mC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S	G	Q
Query Conservation
Alig confidence									.																	.							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																	.							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	G	I	X	S	T	.	A	Q	I	V	P	R	F	V	A	G	L	R	E	S	A	Q	.	A	E	V	R	G	I	.	A	S	R	R	L	E	N	A	Q	K	X	A	K	E	L	A	I	P	V	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.		T	T											S	S	S	.							.			S	S											T	T				B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.																	.							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.
Predicted Secondary structure																																																.	.																				.	.	.	.	.
Query SS confidence																																																.	.																				.	.	.	.	.
Query Sequence		Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	A	N	K	E	S	L	.	.	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	L	.	.	.	.	.	P	V	D	S	E	H	N	A
Query Conservation																																																.	.																				.	.	.	.	.
Alig confidence																																										.						.	.																				.	.	.	.	.
Template Conservation																																										.
Template Sequence		G	S	Y	E	E	L	C	K	D	E	T	I	D	I	I	Y	I	P	T	Y	N	Q	G	H	Y	S	A	A	K	L	A	L	S	Q	G	K	P	V	L	L	.	E	K	P	F	T	L	N	A	A	E	A	E	E	L	F	A	I	A	Q	E	Q	G	V	F	L	X	E	A	Q	K	S	V	F	L	P	I	T	Q	K
Template Known Secondary structure		S	S						T		T	T		S								T	T												T	T						.		S	S			S	S														T	T								S	G	G	G
Template Predicted Secondary structure																																										.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	Q	S	L	P	Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A	T	M	M	N	K	G	L	E	Y	I	E	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	A	T	I	Q	E	G	.	.	.	.	.	.	.	.	.	.	G	L	G	E	I	L	W	V	Q	S	V	T	A	Y	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	H	I	P	W	F	Y	S	R	E	A	G	G	G	A	L	H	G	S	G	S	Y	P	L	Q	Y	L
Template Known Secondary structure								T	T	.	.	.	.	.	.	.	.	.	.	T	T		S											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T		S	S	S	S		S						T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.											.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		R	W	L	F	N	A	S	A	S	Q	M	E	V	L	I	H	P	Q	S	.	.	.	.	.	V	I	H	S	M	V	R	Y	Q	D	G	S	V
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	V	L	G	K	E	I	Q	E	V	T	G	T	A	T	Y	Q	Q	G	A	T	D	S	Q	C	N	L	A	L	K	F	A	E	G	T	L
Template Known Secondary structure					S	S														S	S	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions