Return to main results Retrieve Phyre Job Id

Job DescriptionP45568
Confidence99.60%DateThu Jan 5 12:03:20 GMT 2012
Rank16Aligned Residues130
% Identity18%Templatec3do5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60......... 70.........80.
Predicted Secondary structure 

















.







Query SS confidence 


































































.











Query Sequence  QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTML. QQQGSRTEVLSG
Query Conservation 

 








  




    
 
 





  
   
 

   
 
  
 
 
      

  
.        
  
Alig confidence 






.


















..............

























.











Template Conservation 





 .
 

      
      
 ..............       



                            
Template Sequence  KIAIVGF. GTVGQGVAELLIRKREEIE. . . . . . . . . . . . . . KAIGEFKVTAVADSKSSISGDFSLVEALRXKRETGXLRD
Template Known Secondary structure 

.ST..............


SS
SS

SS
SB
Template Predicted Secondary structure 

.
..............
















Template SS confidence 















































































   3...... 10.........20........ .30.........40.........50.........60.......
 
   82.......90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 
















Query SS confidence 

































































Query Sequence  QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLL
Query Conservation   
 
  
     




 

 
  

  

 

  

 









 

  
   

  
  

Alig confidence 

































































Template Conservation    
  
 
    




  
           


 








   
    

  


  
  
 
Template Sequence  DAKAIEVVRSADYDVLIEASVTREGVNYIREALKRGKHVVTSNKGPLVAEFHGLXSLAERNGVRLX
Template Known Secondary structure 


S

S





TTT


STT

Template Predicted Secondary structure 





















Template SS confidence 

































































   68.70.........80.........90.........100.........110.........120.........130...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions