Return to main results Retrieve Phyre Job Id

Job DescriptionP45568
Confidence89.68%DateThu Jan 5 12:03:20 GMT 2012
Rank372Aligned Residues74
% Identity18%Templatec3dl2A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS
Query Conservation 



 








  




    
 
 





  
   
 

   
 
  
 
 
      

  
        
  
Alig confidence 








.















































......................
Template Conservation 
 

 



.
 

   
  
       

 
 
  
   
 
 

            ......................
Template Sequence  VNKITVVGG. GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISK. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 



.ST

S

S
GGG
TTT
TTS......................
Template Predicted Secondary structure 


.
















......................
Template SS confidence 















































































   182.......190 .........200.........210.........220.........230........
 
   81........90.........100...
Predicted Secondary structure 









Query SS confidence 






















Query Sequence  GQQAACDMAALEDVDQVMAAIVG
Query Conservation 
 
 
  
     




 

 
Alig confidence  ......
















Template Conservation  ......
      








 
Template Sequence  . . . . . . DLSASAHSKVVIFTVNS
Template Known Secondary structure  ......
GGGGTT
S



Template Predicted Secondary structure  ......









Template SS confidence 






















   239240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions