Job Description P45568 Confidence 98.41% Date Thu Jan 5 12:03:20 GMT 2012 Rank 51 Aligned Residues 217 % Identity 14% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

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		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		Q	L	T	I	L	G	S	.	.	.	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L
Query Conservation									.	.	.
Alig confidence									.	.	.																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	.	L	Y	S	P	K	I	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S			S	S	S	S	S	G	G	G	T								T	T	T	T						.				S	S											T	T		T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.					.	.	.	.	.																										.	.
Query SS confidence																																								.	.	.	.	.	.					.	.	.	.	.																										.	.
Query Sequence		S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	.	.	.	.	.	.	K	T	I	L	.	.	.	.	.	L	A	N	K	E	S	L	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	.	.
Query Conservation																																								.	.	.	.	.	.					.	.	.	.	.																										.	.
Alig confidence		.	.	.	.																																			.	.	.	.	.	.					.	.	.	.	.								.	.	.	.															.	.
Template Conservation		.	.	.	.																																																									.	.	.	.
Template Sequence		.	.	.	.	T	L	E	S	F	A	S	S	S	T	I	D	M	I	V	I	A	I	Q	V	A	S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	.	.	.	.	E	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I
Template Known Secondary structure		.	.	.	.	S								S	S		S						S		G	G	G												G	G	G		T	T								S	S			S	S					.	.	.	.											T
Template Predicted Secondary structure		.	.	.	.																																																									.	.	.	.
Template SS confidence
						77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	P	V	D	S	E	H	N	A	I	F	Q	S	L	P	Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A
Query Conservation		.	.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		S	L	Q	G	R	K	S	P	Y	I	L	R	A	K	E	L	I	S	Q	G	.	.	.	.	.	.	.	.	.	.	Y	I	G	D	I	N	S	I	E	I	A	G	N	G	G	W	Y	G	Y	E	R	.	.	.	.	.	.	.	.	.	.	.	P	V	K	S	P	K	Y	I	Y	E	I	G	.	.	N	G	V	D
Template Known Secondary structure				G	G	G	G													T	T	.	.	.	.	.	.	.	.	.	.	T	T		S											S	S		S	S			.	.	.	.	.	.	.	.	.	.	.		T	T	S		G	G	G	G	S	T	T	.	.	S	S		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.											.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																								.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	M	N	K	G	L	E	Y	I	E	.	A	R	W	L	F	N	A	S	A	S	Q	M	E	V	L	I	H	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	H	S	M	V	R	Y	Q	D	G	S	V	L	A	Q	L	G
Query Conservation													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	T	T	T	F	G	H	T	I	D	I	L	Q	Y	M	T	S	S	Y	F	S	R	I	N	A	M	V	F	N	N	I	P	E	Q	E	L	I	D	E	R	G	N	R	L	G	Q	R	V	P	K	T	V	P	D	H	L	L	F	Q	G	T	L	L	N	G	N	V	P	V	S	C	S
Template Known Secondary structure		T	T	T	T														T															S							S	S	S											S		S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions