Job Description P45568 Confidence 100.00% Date Thu Jan 5 12:03:20 GMT 2012 Rank 6 Aligned Residues 364 % Identity 35% Template c3a14B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: crystal structure of dxr from thermotoga maritima, in complex with2 nadph Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S	G
Query Conservation
Alig confidence																											.																																						.	.	.	.	.	.	.	.	.
Template Conservation																											.																																						.	.	.	.	.	.	.	.	.
Template Sequence		R	T	L	V	I	L	G	A	T	G	S	I	G	T	Q	T	L	D	V	L	K	K	V	K	G	.	I	R	L	I	G	I	S	F	H	S	N	L	E	L	A	F	K	I	V	K	E	F	N	V	K	N	V	A	I	T	G	D	V	E	F	E	D	.	.	.	.	.	.	.	.	.	S	S	I	N	V	W	K	G
Template Known Secondary structure								T	T	T	S															S	.									S	S												T	T								S	S						.	.	.	.	.	.	.	.	.	S	S	S					S
Template Predicted Secondary structure																											.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	A	N	K	E	S	L	V	T	C	G	R	L	F	M	D	A	V	K	Q	S	K	A	Q	L	L	P	V	D	S	E	H	N	A	I	F	Q	S	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	S	I	E	E	M	L	E	A	L	K	P	D	I	T	M	V	A	V	S	G	F	S	G	L	R	A	V	L	A	S	L	E	H	S	K	R	V	C	L	A	N	K	E	S	L	V	C	G	G	F	L	V	K	K	K	L	K	E	K	G	T	E	L	I	P	V	D	S	E	H	S	A	I	F	Q	V	M	E
Template Known Secondary structure		T	T												S								S	T	T													S							S																									S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	I	Q	H	N	L	G	Y	A	D	L	E	Q	N	G	V	V	S	I	L	L	T	G	S	G	G	P	F	R	E	T	P	L	R	D	L	A	T	M	T	P	D	Q	A	C	R	H	P	N	W	S	M	G	R	K	I	S	V	D	S	A	T	M	M	N	K	G	L	E	Y	I	E	A	R	W	L	F	N	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	K	V	V	L	T	A	S	G	G	A	L	R	D	W	K	I	S	K	I	D	R	A	R	P	.	.	.	.	.	E	D	V	L	K	M	G	A	R	I	T	V	D	S	A	T	M	V	N	K	A	F	E	V	L	E	A	M	E	L	F	E	L
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T	T	T	S						T	T				.	.	.	.	.																	T															T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		154	.															.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	Q	M	E	V	L	I	H	P	Q	S	V	I	H	S	M	V	R	Y	Q	D	G	S	V	L	A	Q	L	G	E	P	D	M	R	T	P	I	A	H	T	M	A	W	P	N	R	V	N	S	G	V	K	P	L	D	F	C	K	L	S	A	L	T	F	A	A	P	D	Y	D	R	Y	P	C	L	K	L	A
Query Conservation
Alig confidence																																																					.	.	.
Template Conservation																																																					.	.	.
Template Sequence		P	F	E	K	I	E	V	K	I	H	R	E	G	L	V	H	G	A	V	V	L	P	D	G	N	V	K	M	V	V	S	P	P	D	M	R	I	P	I	S	Y	A	L	F	Y	P	R	R	V	A	L	.	.	.	E	P	F	F	L	R	T	I	S	L	S	F	E	D	P	D	P	E	K	Y	P	A	F	F	L	L
Template Known Secondary structure			G	G	G							T	T										T	T	S									S		T										T	T	S				S	.	.	.													B				T	T	T		T	T	G	G	G
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		M	E	A	F	E	Q	G	Q	A	A	T	T	A	L	N	A	A	N	E	I	T	V	A	A	F	L	A	Q	Q	I	R	F	T	D	I	A	A	L	N	L	S	V	L	E	K	M	D	M	R	E	.	P	Q	C	V	D	D	V	L	S	V	D	A	N	A	R	E	V	A	R	K	E	V	M	R	L	A	S
Query Conservation																																																				.
Alig confidence							.																																													.
Template Conservation							.
Template Sequence		K	E	I	K	D	.	S	Y	A	L	R	T	A	F	N	A	A	D	E	V	A	V	E	A	F	L	K	G	R	I	R	F	G	G	I	H	R	V	I	E	K	T	L	E	E	F	Q	G	Y	P	Q	P	R	T	L	D	D	V	E	R	I	H	F	E	A	I	K	K	A	E	R	V	T	E	W	L	S	S
Template Known Secondary structure					T	T	.																					T	T	S	S		T	T												T	T	T	T						S
Template Predicted Secondary structure							.
Template SS confidence
		297	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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