Job Description P45568 Confidence 84.81% Date Thu Jan 5 12:03:20 GMT 2012 Rank 457 Aligned Residues 78 % Identity 10% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		M	K	Q	.	.	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V
Query Conservation					.	.
Alig confidence					.	.							.																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	R	C	K	I	T	V	V	G	V	.	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	.	.	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	S	L	F	L	S	T	P	K	I	V
Template Known Secondary structure													.	S												T	T	T	S		S				.	.				S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T		S
Template Predicted Secondary structure													.																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		F	G	K	D	Y	.	.	.	.	.	N	V	S	A	N	S	K	L	V	I	I	T	A	G
Template Known Secondary structure				S	S	G	.	.	.	.	.	G	G	G	T	T									S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		78	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions