Job Description P45568 Confidence 96.41% Date Thu Jan 5 12:03:20 GMT 2012 Rank 149 Aligned Residues 87 % Identity 18% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L	K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S	G	Q
Query Conservation
Alig confidence									.																.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.								.
Template Conservation									.																.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.								.
Template Sequence		G	L	C	I	V	G	M	.	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	.	S	F	E	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	D	V	D	P	E	K	V	G	R	P	V	.	.	.	.	.	.	.	R	G	G	V	I	E	H	.	V
Template Known Secondary structure									.	S										S				S	.	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	T	T	T				.	.	.	.	.	.	.	T	T						.	G
Template Predicted Secondary structure									.																.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.								.
Template SS confidence
		82	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.																						110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.		130
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Q	A	A	C	D	M	A	A	L	E	D	V	D	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	.	K	T	I	L
Query Conservation																																					.
Alig confidence											.																										.
Template Conservation											.
Template Sequence		D	L	L	P	Q	R	V	P	G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L
Template Known Secondary structure		G	G					S	T	T	.	T								S																T
Template Predicted Secondary structure											.
Template SS confidence
		131	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions