Return to main results Retrieve Phyre Job Id

Job DescriptionP45568
Confidence92.52%DateThu Jan 5 12:03:20 GMT 2012
Rank263Aligned Residues168
% Identity13%Templatec1ulzA_
PDB info PDB header:ligaseChain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS
Query Conservation 



 








  




    
 
 





  
   
 

   
 
  
 
 
      

  
        
  
Alig confidence 








.













..





















...






...............






Template Conservation     


   .
  
  
 



  ..
  

 
    
        

...       ...............       
Template Sequence  VNKVLVANR. GEIAVRIIRACKEL. . GIPTVAIYNEVESTARHVKLAD. . . EAYMIGT. . . . . . . . . . . . . . . DPLDTYL
Template Known Secondary structure 
SS


...T


GGGTT
SS...

S...............STT
Template Predicted Secondary structure 


.

..











...


...............






Template SS confidence 















































































   2.......10 .........20.... .....30.........40...... ...50... ......60
 
   81........90.........100..... ....110.........120.........130... ......140........ .150..
Predicted Secondary structure 









.




..


.....
Query SS confidence 
























.



























. .














. . . . .



Query Sequence  GQQAACDMAALEDVDQVMAAIVGAA. GLLPTLAAIRAGKTILLANKESLVTCGR. . LFMDAVKQSKAQLLP. . . . . VDSE
Query Conservation 
 
 
  
     




 

 
  .

  

 

  

 









 

 .. 
   

  
  


.....



Alig confidence 
























.



























..














.....



Template Conservation 
   
   
    

 
 
      
    
      

   


        

          


 
          
Template Sequence  NKQRIINLALEVGADAIHPGYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSL
Template Known Secondary structure 
TT



SSTTTT
TT
SSS
STT

B

B
SSS


Template Predicted Secondary structure 





























Template SS confidence 















































































   61........70.........80.........90.........100.........110.........120.........130.........140
 
   153......160.........170.........180.........190.........
Predicted Secondary structure 




























Query SS confidence 














































Query Sequence  HNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLA
Query Conservation 





 
                 
  










    
 
 
Alig confidence 










..........

























Template Conservation   
         .......... 





  
 
  

  
    

 
Template Sequence  EEAKALAREIG. . . . . . . . . . YPVLLKATAGGGGRGIRICRNEEELV
Template Known Secondary structure 
..........SS
SSSS

S
SS
Template Predicted Secondary structure 
..........














Template SS confidence 














































   141........150. ........160.........170.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions