Return to main results Retrieve Phyre Job Id

Job DescriptionP45568
Confidence91.25%DateThu Jan 5 12:03:20 GMT 2012
Rank313Aligned Residues78
% Identity13%Templatec1n7gB_
PDB info PDB header:lyaseChain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG
Query Conservation 


 








  




    
 
 





  
   
 

   
 
  
 
 
      

  
        
  
Alig confidence 























..




.....................



























Template Conservation 
 










  

  

  
..  
  .....................  
                   
     
Template Sequence  KIALITGITGQDGSYLTEFLLGKG. . YEVHG. . . . . . . . . . . . . . . . . . . . . LIRRSSNFNTQRINHIYIDKALMKLHYA
Template Known Secondary structure 
TTTSTTT..
.....................


SS


TTT



S
Template Predicted Secondary structure 






..
.....................












Template SS confidence 















































































   2930.........40.........50.. ..... ..60.........70.........80.....
 
   82.......90.........100..
Predicted Secondary structure  ....







Query SS confidence  . . . .




















Query Sequence  . . . . QQAACDMAALEDVDQVMAAIV
Query Conservation  .... 
 
  
     




 

 
Alig confidence  ....




















Template Conservation 

 
                   

Template Sequence  DLTDASSLRRWIDVIKPDEVYNLAA
Template Known Secondary structure 
TT


S


Template Predicted Secondary structure 






Template SS confidence 
























   91........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions